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Os09g0376900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Potassium transporter 13 (AtPOT13) (AtKT5).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.86 (0.0188) R2 : 0.821
β1 : 1.76 (0.079) R2dD : 0.292 R2D : -0.0898
β2 : 1.62 (0.0432) R2dC : 0.55 R2C : 0.547
β3 : -1.83 (0.0827) R2dE : 0.327 R2E : -0.0874
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.573 (0.0455) R2dN8 : 0.12 R2N8 : -0.111
σ : 0.335
deviance : 51.77
__
_____
C
peak time of C : 10.3
E
wheather : temperature
threshold : 12.42
memory length : 8486
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.65 0.344 9.82 2.06 1.59 -1.42 -0.385 2.75 0.551 10.6 20.26 1741 -- --
52.19 0.336 9.88 1.69 1.56 -1.52 -0.508 -- 0.522 10.3 15.76 8361 -- --
53.9 0.342 9.81 2.15 1.56 -1.44 -- 3.19 0.579 10.6 21.16 1820 -- --
51.77 0.335 9.86 1.76 1.62 -1.83 -- -- 0.573 10.3 12.42 8486 -- --
143.02 0.557 9.82 2.32 -- -2.35 -- 4.11 0.69 -- 21.08 829 -- --
105.58 0.482 9.98 0.806 1.65 -- -0.418 -- 0.0376 10.4 -- -- -- --
106.29 0.483 9.98 0.789 1.65 -- -- -- 0.0366 10.5 -- -- -- --
153.81 0.578 9.93 1.29 -- -2.2 -- -- 0.412 -- 18.61 829 -- --
97.44 0.46 9.96 -- 1.57 -0.814 -- -- 0.086 10.2 22.3 2655 -- --
274 0.773 10 0.761 -- -- -- -- 0.0303 -- -- -- -- --
122.72 0.518 10 -- 1.65 -- -- -- -0.0513 10.4 -- -- -- --
200.19 0.659 9.98 -- -- -1.74 -- -- 0.209 -- 21.12 817 -- --
289.29 0.794 10 -- -- -- -- -- -0.0542 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.17 radiation 1 43200 > th dose independent rect. 18 11
2 49.54 radiation 1 43200 > th dose independent rect. 18 1
23 51.93 radiation 1 43200 < th dose independent rect. 18 11
26 52.09 radiation 1 43200 < th dose independent rect. 18 9
27 52.10 radiation 1 43200 < th dose independent rect. 18 7
29 52.10 radiation 1 14400 < th dose dependent rect. 18 1
33 52.14 radiation 1 14400 < th dose dependent rect. 4 1
34 52.15 radiation 1 43200 < th dose independent rect. 18 1
36 52.15 radiation 1 14400 < th dose dependent rect. 18 5
42 52.24 radiation 1 14400 > th dose independent rect. 18 14
51 52.40 humidity 90 14400 < th dose independent rect. 18 9
53 52.41 radiation 10 14400 < th dose dependent rect. 18 11
56 52.44 humidity 90 14400 < th dose independent rect. 20 7
65 52.53 temperature 30 1440 < th dose dependent rect. 7 2
68 52.58 temperature 15 1440 > th dose dependent rect. 7 2
70 52.62 humidity 90 14400 > th dose dependent rect. 21 5
75 52.79 humidity 90 43200 < th dose independent rect. 9 1
81 52.86 radiation 1 14400 < th dose independent rect. 18 14
83 52.90 wind 3 43200 > th dose dependent rect. 5 10
85 52.96 humidity 90 14400 < th dose independent rect. 21 4
86 52.96 radiation 1 14400 < th dose dependent rect. 18 16
91 52.97 temperature 20 720 > th dose dependent rect. 16 20
95 53.03 radiation 1 14400 < th dose independent rect. 18 16
96 53.03 wind 5 43200 > th dose dependent rect. 8 8
99 53.05 radiation 1 14400 < th dose dependent rect. 18 14
100 53.06 humidity 90 43200 > th dose independent rect. 9 1
104 53.08 radiation 40 14400 < th dose dependent rect. 18 7
120 53.20 radiation 40 14400 < th dose dependent rect. 18 9
121 53.21 atmosphere 1005 43200 > th dose independent rect. 18 1
150 53.40 humidity 90 14400 > th dose dependent rect. 18 13
162 53.45 humidity 90 14400 > th dose dependent rect. 14 17
163 53.45 humidity 90 14400 > th dose dependent rect. 10 21
180 53.55 wind 5 43200 > th dose dependent sin 1 NA
192 53.60 atmosphere 1005 43200 < th dose independent rect. 18 1
198 53.62 humidity 90 14400 > th dose dependent rect. 22 3
201 53.63 wind 5 43200 > th dose independent rect. 5 11
209 53.66 atmosphere 1005 43200 > th dose independent rect. 16 1
210 53.66 wind 5 43200 < th dose independent rect. 5 11
214 53.67 atmosphere 1005 43200 > th dose independent rect. 16 3
219 53.69 wind 9 43200 < th dose dependent rect. 9 3
222 53.71 wind 7 43200 > th dose independent rect. 2 14
226 53.72 wind 7 43200 < th dose independent rect. 2 14
227 53.73 wind 5 43200 > th dose independent rect. 4 13
228 53.73 humidity 90 14400 > th dose dependent sin 13 NA
237 53.75 wind 9 43200 < th dose dependent rect. 8 6
241 53.76 wind 7 43200 > th dose independent rect. 23 17
263 53.81 wind 7 43200 < th dose independent rect. 23 17
304 53.91 humidity 90 14400 > th dose dependent rect. 21 16
306 53.92 humidity 90 14400 > th dose dependent rect. 21 18
313 53.93 wind 5 43200 > th dose dependent rect. 5 17
318 53.95 wind 5 43200 > th dose dependent rect. 7 15
321 53.97 wind 7 43200 > th dose independent sin 3 NA
322 53.97 wind 7 43200 < th dose independent sin 3 NA
382 54.11 radiation 1 14400 < th dose independent rect. 5 3
391 54.13 radiation 1 14400 > th dose independent rect. 5 3
409 54.17 temperature 20 1440 > th dose dependent rect. 4 8
410 54.18 wind 3 43200 > th dose independent rect. 9 3
415 54.19 humidity 90 14400 < th dose independent rect. 10 18
433 54.21 temperature 20 1440 > th dose dependent rect. 4 19
435 54.22 wind 5 43200 > th dose independent sin 1 NA
458 54.26 humidity 90 14400 > th dose independent rect. 21 6
467 54.27 wind 5 43200 > th dose independent rect. 9 6
478 54.28 temperature 10 720 > th dose dependent rect. 16 19
480 54.29 radiation 1 14400 > th dose independent sin 9 NA
494 54.30 humidity 90 14400 < th dose independent sin 14 NA
509 54.31 wind 7 43200 > th dose independent rect. 20 20
538 54.35 radiation 1 1440 < th dose dependent rect. 18 7
563 54.38 humidity 90 43200 > th dose independent rect. 22 1
565 54.38 wind 5 43200 > th dose independent rect. 5 17
572 54.39 humidity 80 43200 < th dose independent rect. 21 2
601 54.42 wind 5 43200 < th dose independent rect. 9 6
609 54.43 radiation 1 14400 < th dose independent sin 9 NA
621 54.44 radiation 1 14400 > th dose dependent rect. 18 1
663 54.47 temperature 20 1440 > th dose dependent sin 4 NA
673 54.48 wind 7 43200 < th dose independent rect. 20 20
679 54.49 wind 3 43200 > th dose dependent rect. 20 1
692 54.50 wind 3 43200 > th dose dependent rect. 20 21
724 54.54 wind 9 43200 < th dose dependent rect. 9 1
758 54.56 wind 9 43200 < th dose dependent rect. 11 1
765 54.57 radiation 1 14400 < th dose independent rect. 21 11
768 54.57 temperature 20 1440 > th dose dependent no NA NA
815 54.62 radiation 1 14400 < th dose independent rect. 2 6
827 54.63 wind 5 43200 < th dose independent rect. 5 17
829 54.63 temperature 20 4320 > th dose dependent rect. 16 2
839 54.63 temperature 20 1440 > th dose dependent rect. 21 23
894 54.67 radiation 1 14400 < th dose dependent rect. 5 3
916 54.69 temperature 25 4320 < th dose independent rect. 6 8
975 54.72 wind 5 43200 > th dose dependent rect. 9 22
976 54.72 temperature 20 1440 > th dose dependent rect. 11 23