Os09g0376800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Trehalose-6-phosphate synthase (Fragment).
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Os09g0376800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Trehalose-6-phosphate synthase (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 156.85 | 0.588 | 7.56 | -0.155 | 0.598 | 1.31 | 2.26 | -1.5 | 0.305 | 19.5 | 20 | 22 | -- | -- |
| 161.51 | 0.592 | 7.54 | -0.153 | 0.49 | 1.52 | 2.3 | -- | 0.273 | 17.6 | 20 | 20 | -- | -- |
| 167.21 | 0.602 | 7.56 | -0.186 | 0.69 | 1.16 | -- | -0.709 | 0.297 | 20.5 | 21.26 | 20 | -- | -- |
| 169.83 | 0.607 | 7.56 | -0.168 | 0.708 | 1.14 | -- | -- | 0.295 | 20.6 | 21.07 | 20 | -- | -- |
| 184.84 | 0.633 | 7.54 | -0.182 | -- | 1.46 | -- | -0.73 | 0.3 | -- | 20 | 18 | -- | -- |
| 191.62 | 0.649 | 7.59 | -0.213 | 1.68 | -- | -0.206 | -- | 0.238 | 22.8 | -- | -- | -- | -- |
| 191.79 | 0.649 | 7.59 | -0.204 | 1.68 | -- | -- | -- | 0.239 | 22.8 | -- | -- | -- | -- |
| 187.86 | 0.638 | 7.55 | -0.126 | -- | 1.44 | -- | -- | 0.288 | -- | 18.6 | 15 | -- | -- |
| 170.57 | 0.608 | 7.55 | -- | 0.705 | 1.14 | -- | -- | 0.314 | 20.5 | 21.2 | 20 | -- | -- |
| 366.71 | 0.895 | 7.55 | -0.17 | -- | -- | -- | -- | 0.249 | -- | -- | -- | -- | -- |
| 192.89 | 0.65 | 7.59 | -- | 1.68 | -- | -- | -- | 0.261 | 22.8 | -- | -- | -- | -- |
| 188.5 | 0.639 | 7.54 | -- | -- | 1.44 | -- | -- | 0.305 | -- | 18.59 | 15 | -- | -- |
| 367.47 | 0.895 | 7.55 | -- | -- | -- | -- | -- | 0.268 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.38 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 2 | 147.20 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 16 | 149.67 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 21 | 149.93 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 35 | 150.07 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 48 | 150.17 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 23 | 8 |
| 80 | 150.39 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 23 | 17 |
| 83 | 150.40 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 2 | 14 |
| 116 | 150.47 | atmosphere | 1015 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 182 | 150.59 | atmosphere | 1010 | 14400 | < th | dose dependent | sin | 4 | NA |
| 221 | 150.63 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 13 | 18 |
| 292 | 150.70 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 377 | 150.77 | atmosphere | 1010 | 14400 | < th | dose dependent | no | NA | NA |
| 388 | 150.77 | atmosphere | 1010 | 14400 | < th | dose dependent | rect. | 17 | 23 |
| 483 | 150.85 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 604 | 150.97 | atmosphere | 995 | 14400 | > th | dose dependent | sin | 6 | NA |
| 682 | 151.04 | atmosphere | 995 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 987 | 151.33 | wind | 5 | 4320 | > th | dose dependent | rect. | 17 | 1 |