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Os09g0376300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.77 (0.0337) R2 : 0.896
β1 : -1.07 (0.124) R2dD : 0.0192 R2D : 0.0193
β2 : 3.41 (0.0954) R2dC : 0.347 R2C : 0.561
β3 : -2.22 (0.0748) R2dE : 0.253 R2E : 0.496
β4 : 3.76 (0.401) R2dD*C : 0.0183 R2D*C : 0.0187
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.738 (0.0722) R2dN8 : 0.0316 R2N8 : 0.0206
σ : 0.629
deviance : 182.29
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_____
C
peak time of C : 5.38
E
wheather : temperature
threshold : 19.39
memory length : 279
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 12.4
open length of G : 14

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
180.39 0.631 7.76 -1.03 3.44 -2.23 3.93 0.702 -0.711 5.43 19.4 280 12.4 14.1
182.29 0.629 7.77 -1.07 3.41 -2.22 3.76 -- -0.738 5.38 19.39 279 12.4 14
213.9 0.681 7.78 -1.08 3.29 -2.19 -- -0.0348 -0.671 5.47 19.4 262 12.3 13.9
212.77 0.679 7.78 -1.05 3.34 -2.2 -- -- -0.721 5.5 19.49 268 12.4 13.8
441.27 0.978 7.93 -1.51 -- -3.07 -- -0.699 -0.893 -- 19.14 122 12.7 11.8
264.02 0.762 7.76 -1.61 5.11 -- 2.63 -- -0.944 7.02 -- -- -- --
282 0.786 7.76 -1.56 5.11 -- -- -- -0.95 7.05 -- -- -- --
332.7 0.85 7.91 -0.92 -- -4.08 -- -- -0.562 -- 19.28 282 12.2 9.44
243.55 0.727 7.76 -- 3.3 -2.31 -- -- -0.596 5.4 19.6 262 12.6 13.6
1658.64 1.9 7.88 -1.46 -- -- -- -- -0.857 -- -- -- -- --
346.05 0.87 7.72 -- 5.1 -- -- -- -0.776 7.07 -- -- -- --
351.17 0.873 7.8 -- -- -4.12 -- -- -0.516 -- 19.11 261 12.1 10.3
1714.72 1.93 7.84 -- -- -- -- -- -0.695 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 187.67 temperature 20.0 270 > th dose independent rect. 12 14
2 188.80 temperature 20.0 90 > th dose independent rect. 14 19
6 190.86 temperature 20.0 30 > th dose independent rect. 14 14
12 192.59 temperature 10.0 270 > th dose dependent rect. 12 14
25 194.81 atmosphere 1015.0 270 < th dose independent rect. 22 10
30 195.36 temperature 20.0 270 > th dose independent rect. 12 18
54 198.25 temperature 15.0 270 > th dose independent rect. 22 10
55 198.26 temperature 10.0 270 > th dose dependent rect. 22 10
57 198.72 temperature 10.0 270 > th dose dependent rect. 12 20
85 201.12 humidity 50.0 270 > th dose dependent rect. 22 10
88 201.22 temperature 30.0 270 < th dose independent rect. 22 10
89 201.22 humidity 50.0 270 > th dose independent rect. 22 10
91 201.22 atmosphere 995.0 270 > th dose independent rect. 22 10
92 201.22 temperature 10.0 270 > th dose independent rect. 8 14
93 201.39 wind 9.0 270 < th dose independent rect. 22 10
94 201.54 radiation 40.0 270 < th dose independent rect. 22 10
102 202.17 atmosphere 1010.0 270 < th dose independent rect. 12 20
119 203.11 precipitation 0.1 270 < th dose independent rect. 8 14
120 203.11 precipitation 0.1 270 < th dose dependent rect. 8 14
131 203.69 precipitation 0.1 270 < th dose independent rect. 22 10
132 203.69 precipitation 0.1 270 < th dose dependent rect. 22 10
144 204.20 atmosphere 1015.0 270 < th dose dependent rect. 22 10
173 205.58 wind 9.0 270 < th dose independent rect. 8 14
187 206.10 humidity 50.0 270 > th dose independent rect. 17 20
199 206.69 wind 1.0 270 > th dose independent rect. 13 4
203 206.81 humidity 50.0 270 > th dose independent rect. 8 14
204 207.00 atmosphere 995.0 270 > th dose independent rect. 13 4
209 207.17 wind 9.0 270 < th dose independent rect. 13 4
213 207.36 temperature 20.0 30 > th dose independent sin 12 NA
220 207.59 temperature 10.0 270 > th dose independent rect. 13 4
222 207.59 atmosphere 1010.0 270 < th dose independent rect. 13 4
224 207.59 temperature 10.0 270 > th dose independent rect. 17 20
228 207.71 atmosphere 1010.0 270 < th dose independent rect. 12 15
232 207.81 precipitation 0.1 270 < th dose independent rect. 13 4
234 207.81 precipitation 0.1 270 < th dose dependent rect. 13 4
249 208.30 wind 9.0 270 < th dose independent rect. 17 20
253 208.40 precipitation 0.1 270 < th dose independent rect. 17 20
254 208.40 precipitation 0.1 270 < th dose dependent rect. 17 20
263 208.73 humidity 50.0 90 > th dose independent rect. 10 14
292 209.81 wind 1.0 270 > th dose independent rect. 8 14
309 210.21 radiation 40.0 270 < th dose dependent rect. 22 10
329 210.51 atmosphere 995.0 270 > th dose independent rect. 17 20
333 210.60 radiation 1.0 270 > th dose independent rect. 13 4
364 211.23 wind 1.0 270 > th dose independent rect. 3 10
382 211.58 radiation 40.0 90 < th dose independent rect. 13 6
386 211.69 radiation 1.0 270 > th dose independent rect. 11 21
389 211.71 wind 1.0 270 > th dose independent rect. 17 20
391 211.76 atmosphere 995.0 270 > th dose independent rect. 12 20
414 212.00 wind 9.0 270 < th dose independent rect. 12 20
416 212.01 humidity 50.0 270 > th dose independent rect. 8 4
432 212.13 radiation 1.0 270 > th dose independent rect. 8 4
437 212.18 radiation 1.0 90 < th dose dependent sin 14 NA
458 212.35 atmosphere 995.0 270 > th dose independent rect. 18 18
462 212.38 temperature 10.0 270 > th dose independent rect. 8 4
463 212.38 atmosphere 995.0 270 > th dose independent rect. 8 4
464 212.38 atmosphere 1015.0 270 < th dose independent rect. 8 4
465 212.38 precipitation 0.1 270 < th dose independent rect. 8 4
467 212.38 precipitation 0.1 270 < th dose dependent rect. 8 4
468 212.41 temperature 20.0 10 > th dose independent rect. 23 11
469 212.42 wind 1.0 270 > th dose independent rect. 8 4
472 212.48 humidity 50.0 10 > th dose dependent rect. 24 11
487 212.65 precipitation 0.1 270 < th dose independent rect. 3 10
489 212.65 precipitation 0.1 270 < th dose dependent rect. 3 10
497 212.68 atmosphere 1015.0 10 < th dose dependent rect. 24 10
507 212.86 atmosphere 1015.0 90 < th dose dependent rect. 15 18
511 212.93 temperature 20.0 720 > th dose independent rect. 21 3
515 212.94 wind 9.0 270 < th dose independent rect. 8 4
519 212.95 temperature 15.0 30 > th dose dependent sin 13 NA
573 213.64 precipitation 0.1 270 < th dose independent rect. 12 20
575 213.64 precipitation 0.1 270 < th dose dependent rect. 12 20
595 213.86 temperature 10.0 270 > th dose dependent rect. 13 4
680 214.44 atmosphere 995.0 270 > th dose independent rect. 8 14
683 214.52 temperature 20.0 30 > th dose independent rect. 24 19
686 214.54 precipitation 0.1 30 < th dose independent rect. 14 5
687 214.54 precipitation 0.1 30 < th dose dependent rect. 14 5
688 214.55 radiation 1.0 90 < th dose independent sin 14 NA
697 214.63 humidity 90.0 270 < th dose independent rect. 13 4
705 214.74 radiation 40.0 270 < th dose independent rect. 17 20
711 214.80 temperature 10.0 270 > th dose independent rect. 3 10
712 214.80 atmosphere 995.0 270 > th dose independent rect. 3 10
713 214.80 atmosphere 1015.0 270 < th dose independent rect. 3 10
715 214.81 humidity 60.0 14400 > th dose independent rect. 20 5
745 215.05 atmosphere 995.0 270 > th dose dependent rect. 13 4
748 215.08 temperature 15.0 1440 > th dose independent rect. 16 3
766 215.16 temperature 30.0 90 < th dose dependent rect. 18 7
810 215.43 radiation 40.0 270 < th dose independent rect. 18 18
821 215.52 atmosphere 1015.0 10 < th dose dependent rect. 14 20
833 215.56 atmosphere 1015.0 10 < th dose independent rect. 24 10
859 215.73 wind 9.0 270 < th dose independent rect. 13 14
862 215.75 wind 9.0 270 < th dose dependent rect. 22 10
871 215.78 temperature 10.0 90 > th dose independent rect. 10 14
990 216.50 wind 9.0 10 < th dose independent rect. 24 10
992 216.50 humidity 50.0 10 > th dose independent rect. 24 10
993 216.50 atmosphere 995.0 10 > th dose independent rect. 24 10
995 216.50 temperature 10.0 10 > th dose independent rect. 10 14
1000 216.54 temperature 30.0 90 < th dose dependent rect. 19 10