Os09g0375300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF231, plant domain containing protein.
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Os09g0375300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF231, plant domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 174.67 | 0.621 | 6.49 | 3.04 | 2.22 | -1.23 | -0.547 | 1.47 | 0.303 | 8.53 | 20.4 | 1233 | -- | -- |
| 179.59 | 0.624 | 6.53 | 2.87 | 2.24 | -1.38 | -0.951 | -- | 0.267 | 8.6 | 20.7 | 1405 | -- | -- |
| 175.54 | 0.617 | 6.49 | 3.03 | 2.22 | -1.21 | -- | 1.55 | 0.304 | 8.5 | 20.49 | 1214 | -- | -- |
| 180.24 | 0.625 | 6.53 | 2.78 | 2.24 | -1.5 | -- | -- | 0.249 | 8.54 | 20.2 | 1327 | -- | -- |
| 410.46 | 0.944 | 6.56 | 3.06 | -- | -1.57 | -- | 1.09 | 0.426 | -- | 21.21 | 688 | -- | -- |
| 226.66 | 0.706 | 6.61 | 2.2 | 2.25 | -- | -0.628 | -- | -0.0697 | 8.71 | -- | -- | -- | -- |
| 227.94 | 0.707 | 6.61 | 2.17 | 2.25 | -- | -- | -- | -0.0703 | 8.68 | -- | -- | -- | -- |
| 364.68 | 0.889 | 6.53 | 2.69 | -- | -1.74 | -- | -- | 0.577 | -- | 25.2 | 619 | -- | -- |
| 341.08 | 0.865 | 6.64 | -- | 2.31 | -0.513 | -- | -- | -0.231 | 8.79 | 20.2 | 1327 | -- | -- |
| 514.62 | 1.06 | 6.67 | 2.18 | -- | -- | -- | -- | -0.0513 | -- | -- | -- | -- | -- |
| 352.46 | 0.878 | 6.66 | -- | 2.26 | -- | -- | -- | -0.312 | 8.61 | -- | -- | -- | -- |
| 546.39 | 1.09 | 6.62 | -- | -- | -1.33 | -- | -- | 0.166 | -- | 25.28 | 588 | -- | -- |
| 639.85 | 1.18 | 6.72 | -- | -- | -- | -- | -- | -0.293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 171.07 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 2 | 172.33 | temperature | 20 | 720 | > th | dose independent | rect. | 15 | 19 |
| 4 | 172.47 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 5 | 172.47 | temperature | 20 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 7 | 172.52 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 13 | 172.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 24 | 172.85 | temperature | 20 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 58 | 173.36 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 74 | 173.55 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 138 | 174.08 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 10 |
| 140 | 174.10 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 5 |
| 156 | 174.24 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 22 |
| 201 | 174.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 211 | 174.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 237 | 174.93 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 254 | 175.05 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 280 | 175.25 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 21 |
| 296 | 175.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 1 |
| 302 | 175.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 19 |
| 375 | 175.82 | temperature | 20 | 1440 | > th | dose independent | rect. | 10 | 22 |
| 409 | 175.98 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 410 | 175.98 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 440 | 176.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 10 | 22 |
| 441 | 176.14 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 23 |
| 473 | 176.30 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 497 | 176.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 503 | 176.49 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 23 |
| 555 | 176.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 563 | 176.86 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 23 |
| 581 | 176.99 | temperature | 20 | 1440 | < th | dose dependent | sin | 8 | NA |
| 649 | 177.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 663 | 177.44 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 667 | 177.45 | radiation | 30 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 694 | 177.61 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 708 | 177.68 | radiation | 30 | 4320 | < th | dose independent | rect. | 17 | 15 |
| 787 | 178.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 12 |
| 802 | 178.15 | temperature | 25 | 720 | < th | dose dependent | rect. | 18 | 20 |
| 809 | 178.17 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 3 |
| 878 | 178.46 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 893 | 178.54 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 986 | 178.94 | humidity | 80 | 14400 | > th | dose dependent | rect. | 4 | 3 |