Os09g0373200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Strictosidine synthase family protein.
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Os09g0373200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Strictosidine synthase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 269.89 | 0.772 | 3.96 | -1.11 | 0.423 | 1.18 | 1.38 | -2.37 | -0.298 | 6.02 | 26.42 | 4678 | -- | -- |
| 274.79 | 0.772 | 4 | -1.69 | 0.466 | 1.03 | 1.49 | -- | -0.339 | 5.77 | 26.5 | 6043 | -- | -- |
| 274.03 | 0.771 | 3.96 | -1.12 | 0.437 | 1.18 | -- | -2.31 | -0.306 | 5.2 | 26.42 | 4683 | -- | -- |
| 278.83 | 0.778 | 4.02 | -1.73 | 0.444 | 0.966 | -- | -- | -0.366 | 5.43 | 26.48 | 6080 | -- | -- |
| 283.98 | 0.785 | 3.96 | -1.06 | -- | 1.21 | -- | -2.39 | -0.281 | -- | 26.5 | 4714 | -- | -- |
| 302.08 | 0.815 | 4.08 | -2.13 | 0.461 | -- | 1.39 | -- | -0.616 | 6.13 | -- | -- | -- | -- |
| 306.36 | 0.82 | 4.08 | -2.12 | 0.477 | -- | -- | -- | -0.622 | 5.43 | -- | -- | -- | -- |
| 289.32 | 0.792 | 4.03 | -1.69 | -- | 0.958 | -- | -- | -0.381 | -- | 26.5 | 6129 | -- | -- |
| 288.02 | 0.79 | 3.9 | -- | 0.481 | 1.79 | -- | -- | 0.145 | 5.16 | 20.59 | 26043 | -- | -- |
| 318.2 | 0.834 | 4.09 | -2.11 | -- | -- | -- | -- | -0.611 | -- | -- | -- | -- | -- |
| 425.06 | 0.964 | 4.03 | -- | 0.442 | -- | -- | -- | -0.386 | 5.62 | -- | -- | -- | -- |
| 300.64 | 0.808 | 3.92 | -- | -- | 1.78 | -- | -- | 0.135 | -- | 20.4 | 26294 | -- | -- |
| 435.21 | 0.974 | 4.03 | -- | -- | -- | -- | -- | -0.377 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 265.62 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 15 | 266.51 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 16 | 266.73 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 18 | 266.80 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 20 | 267.10 | humidity | 70 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 21 | 267.15 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 24 | 267.23 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 26 | 267.40 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 33 | 267.44 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 10 |
| 42 | 267.73 | humidity | 60 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 61 | 267.92 | humidity | 70 | 14400 | < th | dose dependent | sin | 11 | NA |
| 64 | 267.95 | humidity | 60 | 14400 | < th | dose independent | sin | 13 | NA |
| 75 | 268.10 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 22 |
| 115 | 268.55 | humidity | 60 | 14400 | > th | dose independent | sin | 13 | NA |
| 166 | 269.05 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 167 | 269.07 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 168 | 269.07 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 172 | 269.16 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 177 | 269.21 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 178 | 269.25 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 179 | 269.25 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 8 |
| 263 | 269.79 | humidity | 60 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 305 | 269.98 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 21 |
| 308 | 269.99 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 314 | 270.04 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 18 |
| 322 | 270.06 | humidity | 70 | 14400 | < th | dose dependent | rect. | 12 | 9 |
| 415 | 270.31 | humidity | 60 | 14400 | < th | dose independent | rect. | 8 | 12 |
| 431 | 270.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 3 |
| 513 | 270.45 | humidity | 60 | 14400 | < th | dose independent | no | NA | NA |
| 564 | 270.53 | humidity | 60 | 14400 | > th | dose independent | rect. | 8 | 12 |
| 582 | 270.57 | humidity | 50 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 614 | 270.63 | humidity | 60 | 14400 | > th | dose independent | rect. | 4 | 16 |
| 655 | 270.66 | humidity | 70 | 14400 | < th | dose dependent | rect. | 10 | 11 |
| 657 | 270.67 | humidity | 60 | 14400 | > th | dose independent | no | NA | NA |
| 758 | 270.77 | humidity | 60 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 773 | 270.79 | humidity | 70 | 14400 | < th | dose dependent | rect. | 8 | 13 |
| 832 | 270.84 | humidity | 70 | 14400 | < th | dose dependent | no | NA | NA |
| 924 | 270.94 | temperature | 30 | 4320 | < th | dose independent | rect. | 14 | 1 |