Os09g0372100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0372100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29.98 | 0.257 | 10.9 | -0.415 | 0.858 | 0.586 | -0.513 | 0.0155 | -0.128 | 15 | 20.8 | 3269 | -- | -- |
| 29.7 | 0.254 | 10.9 | -0.378 | 0.893 | 0.566 | -0.438 | -- | -0.124 | 14.9 | 21.69 | 2376 | -- | -- |
| 30.37 | 0.257 | 10.9 | -0.472 | 0.89 | 0.595 | -- | -0.257 | -0.144 | 14.9 | 22.54 | 2391 | -- | -- |
| 30.4 | 0.257 | 10.9 | -0.394 | 0.894 | 0.567 | -- | -- | -0.117 | 14.9 | 22.7 | 2405 | -- | -- |
| 48.68 | 0.325 | 10.9 | -0.663 | -- | 1.13 | -- | -1.85 | -0.211 | -- | 22.67 | 140 | -- | -- |
| 39.74 | 0.296 | 10.9 | -0.182 | 0.833 | -- | -0.525 | -- | -0.00416 | 15.2 | -- | -- | -- | -- |
| 40.63 | 0.299 | 10.9 | -0.193 | 0.831 | -- | -- | -- | -0.0072 | 15.2 | -- | -- | -- | -- |
| 49.42 | 0.327 | 10.9 | -0.481 | -- | 1.18 | -- | -- | -0.214 | -- | 18.7 | 132 | -- | -- |
| 34.03 | 0.272 | 10.9 | -- | 0.887 | 0.465 | -- | -- | -0.0556 | 14.9 | 23 | 2406 | -- | -- |
| 79.86 | 0.418 | 10.9 | -0.228 | -- | -- | -- | -- | -0.029 | -- | -- | -- | -- | -- |
| 41.62 | 0.302 | 10.9 | -- | 0.835 | -- | -- | -- | 0.0143 | 15.2 | -- | -- | -- | -- |
| 54.93 | 0.345 | 10.9 | -- | -- | 1.02 | -- | -- | -0.142 | -- | 20.28 | 132 | -- | -- |
| 81.24 | 0.421 | 10.9 | -- | -- | -- | -- | -- | -0.00365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.37 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 11 |
| 27 | 29.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 54 | 29.35 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 55 | 29.36 | temperature | 20 | 720 | > th | dose dependent | sin | 18 | NA |
| 61 | 29.42 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 84 | 29.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 20 |
| 107 | 29.74 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 121 | 29.83 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 123 | 29.84 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 146 | 29.91 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 150 | 29.93 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 153 | 29.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 158 | 29.97 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 169 | 30.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 171 | 30.03 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 199 | 30.06 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 4 |
| 210 | 30.10 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 13 |
| 270 | 30.17 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 293 | 30.18 | temperature | 25 | 1440 | > th | dose dependent | rect. | 23 | 18 |
| 296 | 30.19 | temperature | 20 | 4320 | > th | dose dependent | sin | 16 | NA |
| 347 | 30.22 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 371 | 30.23 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 4 |
| 372 | 30.23 | temperature | 20 | 4320 | > th | dose dependent | rect. | 13 | 6 |
| 392 | 30.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 395 | 30.24 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 542 | 30.29 | temperature | 25 | 1440 | > th | dose dependent | sin | 23 | NA |
| 583 | 30.30 | temperature | 20 | 4320 | > th | dose dependent | rect. | 21 | 4 |
| 592 | 30.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 18 |
| 672 | 30.33 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 758 | 30.35 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 796 | 30.35 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 807 | 30.36 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 813 | 30.36 | temperature | 20 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 814 | 30.36 | temperature | 10 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 957 | 30.38 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |