Os09g0371200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily MFS_1 protein.
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Os09g0371200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major facilitator superfamily MFS_1 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.46 | 0.584 | 7.39 | 1.69 | 0.566 | 2.73 | 0.947 | -10.2 | 1.2 | 3.85 | 24.89 | 4339 | -- | -- |
| 152.76 | 0.576 | 7.29 | 2.19 | 0.572 | 2.87 | 0.875 | -- | 0.76 | 3.74 | 12.25 | 25603 | -- | -- |
| 157.03 | 0.584 | 7.38 | 1.71 | 0.582 | 2.71 | -- | -10 | 1.2 | 3.91 | 24.85 | 4365 | -- | -- |
| 154.7 | 0.579 | 7.29 | 2.17 | 0.578 | 2.87 | -- | -- | 0.765 | 3.77 | 12.11 | 25605 | -- | -- |
| 171.78 | 0.61 | 7.4 | 1.79 | -- | 2.64 | -- | -8.52 | 1.07 | -- | 23.5 | 4144 | -- | -- |
| 280.21 | 0.785 | 7.05 | 4.79 | 0.66 | -- | 0.949 | -- | 1.85 | 3.39 | -- | -- | -- | -- |
| 283.04 | 0.788 | 7.05 | 4.77 | 0.666 | -- | -- | -- | 1.84 | 3.47 | -- | -- | -- | -- |
| 172.95 | 0.613 | 7.29 | 2.14 | -- | 2.91 | -- | -- | 0.766 | -- | 12.16 | 25619 | -- | -- |
| 180.88 | 0.626 | 7.45 | -- | 0.593 | 4.27 | -- | -- | 0.0374 | 3.81 | 4.061 | 47520 | -- | -- |
| 307.92 | 0.82 | 7.05 | 4.8 | -- | -- | -- | -- | 1.86 | -- | -- | -- | -- | -- |
| 883.03 | 1.39 | 7.17 | -- | 0.76 | -- | -- | -- | 1.31 | 3.44 | -- | -- | -- | -- |
| 200.23 | 0.659 | 7.46 | -- | -- | 4.3 | -- | -- | 0.0402 | -- | 2.545 | 47520 | -- | -- |
| 915.51 | 1.41 | 7.17 | -- | -- | -- | -- | -- | 1.33 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 135.86 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 11 | 136.42 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 10 |
| 12 | 136.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 8 |
| 14 | 136.44 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 3 |
| 17 | 136.46 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 22 | 137.36 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 10 |
| 26 | 137.44 | radiation | 1.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 56 | 140.35 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 60 | 140.51 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 7 |
| 75 | 141.16 | radiation | 1.0 | 43200 | < th | dose dependent | sin | 12 | NA |
| 100 | 141.92 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 106 | 142.19 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 109 | 142.27 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 110 | 142.28 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 115 | 142.35 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 117 | 142.42 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 5 | 3 |
| 119 | 142.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 131 | 142.50 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 12 |
| 152 | 142.68 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 166 | 142.81 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 188 | 142.90 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 198 | 142.92 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 10 | 23 |
| 209 | 142.96 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 239 | 142.98 | radiation | 1.0 | 43200 | < th | dose dependent | no | NA | NA |
| 263 | 143.01 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 333 | 143.34 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 357 | 143.50 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 386 | 143.60 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 398 | 143.65 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 401 | 143.66 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 6 | 2 |
| 443 | 143.80 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 446 | 143.81 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 2 |
| 504 | 144.08 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 543 | 144.19 | temperature | 20.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 615 | 144.45 | temperature | 20.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 807 | 145.25 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 808 | 145.26 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 870 | 145.53 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 15 |
| 910 | 145.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 915 | 145.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 934 | 145.79 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 22 | 19 |
| 980 | 145.95 | radiation | 1.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 983 | 145.95 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 985 | 145.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 988 | 145.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 1 |