Os09g0371000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0371000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Major facilitator superfamily protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 77.65 | 0.414 | 10.2 | 1.9 | 0.863 | -1.21 | 1.02 | 0.93 | 0.619 | 23.2 | 25.64 | 1389 | -- | -- |
| 76.15 | 0.406 | 10.2 | 1.73 | 0.802 | -1.15 | 1 | -- | 0.79 | 22.8 | 25.4 | 7428 | -- | -- |
| 82.02 | 0.422 | 10.2 | 1.88 | 0.852 | -1.2 | -- | 1.06 | 0.62 | 23.2 | 25.7 | 1394 | -- | -- |
| 80.66 | 0.418 | 10.2 | 1.67 | 0.793 | -1.14 | -- | -- | 0.787 | 22.8 | 25.35 | 7440 | -- | -- |
| 123.71 | 0.518 | 10.2 | 1.92 | -- | -1.22 | -- | 1.22 | 0.642 | -- | 25.52 | 1546 | -- | -- |
| 131.96 | 0.539 | 10.3 | 1.25 | 0.775 | -- | 0.919 | -- | 0.458 | 22.7 | -- | -- | -- | -- |
| 135.47 | 0.545 | 10.3 | 1.22 | 0.769 | -- | -- | -- | 0.455 | 22.7 | -- | -- | -- | -- |
| 118.16 | 0.506 | 10.2 | 1.68 | -- | -1.14 | -- | -- | 0.581 | -- | 26 | 5943 | -- | -- |
| 145.09 | 0.561 | 10.3 | -- | 0.86 | -0.844 | -- | -- | 0.583 | 22.5 | 27.9 | 7686 | -- | -- |
| 172.07 | 0.613 | 10.3 | 1.23 | -- | -- | -- | -- | 0.46 | -- | -- | -- | -- | -- |
| 174.44 | 0.618 | 10.3 | -- | 0.779 | -- | -- | -- | 0.32 | 22.9 | -- | -- | -- | -- |
| 182.49 | 0.629 | 10.3 | -- | -- | -0.776 | -- | -- | 0.305 | -- | 28.04 | 5934 | -- | -- |
| 212.07 | 0.68 | 10.3 | -- | -- | -- | -- | -- | 0.323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 74.71 | temperature | 25 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 5 | 75.12 | temperature | 25 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 9 | 75.26 | temperature | 25 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 21 | 76.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 5 |
| 27 | 76.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 14 | 13 |
| 33 | 76.02 | temperature | 30 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 38 | 76.14 | temperature | 30 | 14400 | > th | dose independent | rect. | 14 | 5 |
| 53 | 76.15 | temperature | 30 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 120 | 76.91 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 142 | 77.06 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 147 | 77.09 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 197 | 77.50 | temperature | 25 | 14400 | > th | dose dependent | sin | 14 | NA |
| 214 | 77.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 240 | 77.75 | temperature | 25 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 324 | 77.97 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 328 | 77.99 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 428 | 78.25 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 514 | 78.40 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 574 | 78.55 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 651 | 78.74 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 669 | 78.83 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 806 | 79.03 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 837 | 79.07 | temperature | 25 | 14400 | > th | dose dependent | no | NA | NA |
| 854 | 79.11 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 862 | 79.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 875 | 79.13 | temperature | 30 | 14400 | < th | dose independent | rect. | 7 | 22 |
| 883 | 79.14 | temperature | 30 | 14400 | < th | dose independent | no | NA | NA |
| 885 | 79.14 | humidity | 70 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 976 | 79.18 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 998 | 79.20 | humidity | 70 | 14400 | < th | dose independent | rect. | 18 | 13 |