Os09g0367900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0367900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 36.88 | 0.285 | 13.6 | -0.321 | 1.45 | -0.542 | -0.145 | -0.257 | -0.152 | 5.72 | 1010 | 5705 | -- | -- |
| 37.07 | 0.284 | 13.6 | -0.365 | 1.45 | -0.521 | -0.082 | -- | -0.15 | 5.72 | 1010 | 5367 | -- | -- |
| 36.84 | 0.283 | 13.6 | -0.347 | 1.45 | -0.54 | -- | -0.243 | -0.163 | 5.73 | 1010 | 6477 | -- | -- |
| 37.01 | 0.283 | 13.6 | -0.405 | 1.46 | -0.511 | -- | -- | -0.165 | 5.74 | 1010 | 6477 | -- | -- |
| 144.38 | 0.56 | 13.6 | -0.325 | -- | -0.61 | -- | -0.15 | 0.0122 | -- | 1009 | 5141 | -- | -- |
| 45.1 | 0.315 | 13.6 | -0.212 | 1.47 | -- | -0.162 | -- | -0.0543 | 5.7 | -- | -- | -- | -- |
| 45.17 | 0.315 | 13.6 | -0.212 | 1.47 | -- | -- | -- | -0.0536 | 5.71 | -- | -- | -- | -- |
| 143.1 | 0.557 | 13.6 | -0.383 | -- | -0.563 | -- | -- | 0.077 | -- | 1009 | 3790 | -- | -- |
| 40.51 | 0.296 | 13.6 | -- | 1.43 | -0.451 | -- | -- | -0.12 | 5.71 | 1010 | 5046 | -- | -- |
| 156.88 | 0.585 | 13.6 | -0.166 | -- | -- | -- | -- | -0.0187 | -- | -- | -- | -- | -- |
| 46.35 | 0.318 | 13.6 | -- | 1.46 | -- | -- | -- | -0.0299 | 5.72 | -- | -- | -- | -- |
| 143.91 | 0.559 | 13.6 | -- | -- | -0.623 | -- | -- | 0.195 | -- | 1009 | 2756 | -- | -- |
| 157.61 | 0.586 | 13.6 | -- | -- | -- | -- | -- | -0.000293 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.71 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 10 | 11 |
| 3 | 36.85 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 7 | 36.95 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 16 | 37.04 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 17 | 37.04 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 23 | 37.05 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 42 | 37.15 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 8 |
| 47 | 37.15 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 52 | 37.16 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 76 | 37.21 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 21 | 14 |
| 101 | 37.25 | atmosphere | 1010.0 | 4320 | > th | dose independent | sin | 4 | NA |
| 149 | 37.29 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 23 | 13 |
| 194 | 37.32 | atmosphere | 1010.0 | 4320 | < th | dose independent | sin | 4 | NA |
| 263 | 37.36 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 280 | 37.36 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 5 | 19 |
| 337 | 37.39 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 338 | 37.39 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 409 | 37.42 | atmosphere | 1010.0 | 4320 | > th | dose independent | no | NA | NA |
| 459 | 37.43 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 16 | 15 |
| 480 | 37.44 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 4 | 20 |
| 570 | 37.48 | atmosphere | 1010.0 | 4320 | < th | dose independent | no | NA | NA |
| 590 | 37.49 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 611 | 37.49 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 8 | 23 |
| 647 | 37.51 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 10 | 23 |
| 668 | 37.53 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 747 | 37.59 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 2 |
| 760 | 37.59 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 2 |
| 774 | 37.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 2 |
| 776 | 37.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 14 | 4 |
| 786 | 37.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 14 | 4 |
| 801 | 37.62 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 816 | 37.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 876 | 37.68 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 20 | 10 |
| 878 | 37.68 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 889 | 37.69 | atmosphere | 1005.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 911 | 37.71 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 921 | 37.71 | atmosphere | 1005.0 | 4320 | > th | dose dependent | rect. | 16 | 5 |
| 966 | 37.74 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 15 | 9 |