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Os09g0365100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Non-protein coding transcript, unclassifiable transcript.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0171) R2 : 0.156
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.33 (0.0359) R2dN8 : 0.202 R2N8 : 0.156
σ : 0.321
deviance : 47.37
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
32.16 0.266 11.3 -0.431 0.469 -0.69 0.52 0.116 -0.461 5.05 93 336 -- --
32.17 0.264 11.3 -0.427 0.471 -0.692 0.556 -- -0.46 5.05 93 336 -- --
32.66 0.266 11.3 -0.447 0.454 -0.679 -- 0.511 -0.46 5.06 93.26 337 -- --
32.91 0.267 11.3 -0.435 0.455 -0.694 -- -- -0.457 5.11 93.4 349 -- --
40.56 0.297 11.3 -0.471 -- -0.342 -- 0.604 -0.426 -- 94 403 -- --
36.81 0.284 11.2 -0.459 0.301 -- 0.341 -- -0.386 4.58 -- -- -- --
37.12 0.285 11.2 -0.462 0.303 -- -- -- -0.388 4.58 -- -- -- --
40.1 0.295 11.3 -0.43 -- -0.402 -- -- -0.43 -- 92.98 1010 -- --
37.8 0.286 11.2 -- 0.478 -0.715 -- -- -0.423 5.04 93.03 314 -- --
42.03 0.303 11.2 -0.45 -- -- -- -- -0.38 -- -- -- -- --
42.74 0.306 11.2 -- 0.295 -- -- -- -0.336 4.62 -- -- -- --
44.8 0.312 11.3 -- -- -0.39 -- -- -0.413 -- 91.67 1062 -- --
47.37 0.321 11.2 -- -- -- -- -- -0.33 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 32.24 humidity 90 270 > th dose dependent rect. 1 6
10 32.61 humidity 90 270 > th dose dependent rect. 1 19
13 32.65 temperature 20 10 > th dose independent rect. 18 14
16 32.67 wind 1 90 < th dose independent rect. 4 14
20 32.69 wind 1 90 < th dose independent rect. 4 10
40 32.78 temperature 20 10 > th dose independent rect. 5 18
50 32.84 humidity 90 270 > th dose dependent sin 7 NA
54 32.88 wind 1 90 < th dose independent rect. 4 4
58 32.90 wind 1 90 < th dose independent sin 3 NA
63 32.92 wind 1 90 < th dose independent rect. 4 6
65 32.93 wind 1 90 > th dose independent sin 3 NA
85 32.98 wind 1 270 < th dose dependent rect. 4 2
94 33.01 wind 1 90 > th dose independent rect. 23 16
96 33.02 wind 1 90 < th dose independent rect. 24 18
100 33.04 wind 1 90 < th dose independent rect. 24 14
110 33.06 temperature 20 10 > th dose independent rect. 16 16
125 33.09 wind 1 90 < th dose dependent rect. 4 14
130 33.10 wind 1 270 < th dose dependent rect. 3 5
134 33.11 wind 1 90 < th dose dependent rect. 4 10
165 33.18 humidity 90 270 > th dose independent rect. 1 6
182 33.23 wind 1 90 < th dose independent rect. 24 8
188 33.23 humidity 90 270 > th dose dependent rect. 17 14
205 33.27 wind 1 90 < th dose independent rect. 24 10
216 33.29 temperature 20 30 > th dose independent rect. 5 16
230 33.31 temperature 20 10 > th dose independent rect. 9 23
280 33.38 temperature 10 10 > th dose dependent rect. 5 18
316 33.44 wind 1 90 < th dose dependent sin 2 NA
353 33.48 temperature 30 10 < th dose dependent rect. 21 8
439 33.59 temperature 20 10 > th dose independent rect. 5 3
454 33.60 radiation 10 4320 > th dose dependent rect. 5 2
468 33.60 wind 1 90 < th dose dependent rect. 24 18
471 33.60 wind 1 90 < th dose dependent rect. 4 21
472 33.61 radiation 10 4320 > th dose independent rect. 5 2
505 33.62 wind 1 90 < th dose dependent rect. 24 14
517 33.63 temperature 20 10 > th dose independent rect. 24 23
518 33.63 humidity 90 270 > th dose dependent no NA NA
585 33.70 temperature 20 90 > th dose independent rect. 4 3
586 33.70 humidity 90 10 > th dose independent rect. 4 6
645 33.76 wind 1 90 > th dose independent rect. 21 22
656 33.78 temperature 20 270 > th dose independent rect. 16 14
660 33.78 temperature 15 720 > th dose dependent rect. 18 3
668 33.79 humidity 90 10 > th dose independent rect. 4 4
670 33.79 wind 5 90 < th dose independent rect. 21 7
673 33.80 wind 7 1440 < th dose independent rect. 5 1
675 33.80 temperature 10 1440 > th dose independent rect. 5 1
678 33.80 temperature 30 1440 < th dose independent rect. 5 1
682 33.80 humidity 50 1440 > th dose independent rect. 5 1
691 33.80 atmosphere 995 1440 > th dose independent rect. 5 1
692 33.80 atmosphere 1015 1440 < th dose independent rect. 5 1
693 33.80 radiation 20 1440 < th dose independent rect. 5 1
702 33.80 temperature 10 1440 > th dose independent rect. 6 23
707 33.80 wind 1 90 < th dose dependent rect. 24 10
713 33.81 humidity 60 4320 > th dose independent rect. 18 11
723 33.83 humidity 60 4320 > th dose independent rect. 18 2
729 33.83 temperature 20 90 > th dose dependent rect. 4 3
747 33.84 radiation 1 10 < th dose dependent rect. 23 17
760 33.86 radiation 10 4320 < th dose independent rect. 24 7
771 33.86 radiation 1 10 < th dose dependent rect. 23 15
776 33.87 radiation 10 4320 < th dose independent rect. 2 5
778 33.87 humidity 60 4320 > th dose independent rect. 18 7
792 33.88 radiation 10 4320 < th dose independent rect. 4 3
808 33.88 radiation 1 10 < th dose dependent rect. 23 13
810 33.88 radiation 1 10 < th dose dependent rect. 21 19
827 33.90 radiation 1 10 < th dose dependent rect. 23 9
834 33.90 radiation 1 10 < th dose dependent rect. 21 17
837 33.91 humidity 90 10 > th dose independent rect. 5 1
845 33.92 humidity 60 4320 < th dose independent rect. 18 1
847 33.92 wind 1 4320 > th dose independent rect. 20 3
852 33.92 wind 5 10 < th dose independent rect. 23 6
864 33.92 wind 1 90 < th dose independent rect. 9 23
865 33.92 temperature 20 10 > th dose dependent rect. 5 1
871 33.92 radiation 1 10 < th dose dependent rect. 21 15
876 33.93 temperature 30 1440 < th dose independent rect. 3 8
896 33.94 temperature 30 1440 < th dose independent rect. 22 13
898 33.94 radiation 1 10 < th dose independent rect. 23 17
908 33.95 temperature 20 10 > th dose independent rect. 5 1
919 33.95 wind 1 90 < th dose independent rect. 12 20
920 33.95 humidity 60 4320 < th dose dependent rect. 18 1
932 33.95 radiation 1 10 < th dose dependent rect. 21 11
948 33.96 temperature 30 1440 < th dose independent rect. 24 11
952 33.96 temperature 30 1440 < th dose independent rect. 20 16
963 33.97 temperature 20 10 > th dose independent sin 10 NA
964 33.97 temperature 30 1440 < th dose independent rect. 8 3
988 33.98 temperature 30 1440 > th dose independent rect. 8 3