Os09g0364100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Lateral organ boundaries, LOB domain containing protein.
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Os09g0364100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Lateral organ boundaries, LOB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.05 | 0.521 | 2.9 | -0.427 | 0.172 | 4.96 | -0.233 | -26.3 | 0.0277 | 22.2 | 1.285e-05 | 29 | 16.5 | -- |
| 135.51 | 0.542 | 2.86 | -0.208 | 0.161 | 3.14 | -0.293 | -- | 0.059 | 21.3 | 2.659e-05 | 28 | 16.4 | -- |
| 122.56 | 0.516 | 2.9 | -0.474 | 0.166 | 4.64 | -- | -27.5 | 0.0193 | 22.1 | 0.09978 | 28 | 17 | -- |
| 135.7 | 0.543 | 2.86 | -0.199 | 0.149 | 3.06 | -- | -- | 0.0304 | 22.1 | 0.005796 | 28 | 16.2 | -- |
| 124.12 | 0.519 | 2.89 | -0.479 | -- | 4.59 | -- | -28.2 | 0.0244 | -- | 0.09998 | 28 | 17.1 | -- |
| 152.82 | 0.58 | 2.87 | -0.163 | 0.146 | -- | -0.317 | -- | -0.0139 | 0.646 | -- | -- | -- | -- |
| 153.24 | 0.58 | 2.87 | -0.151 | 0.148 | -- | -- | -- | -0.0126 | 1.05 | -- | -- | -- | -- |
| 136.94 | 0.545 | 2.86 | -0.196 | -- | 3.04 | -- | -- | 0.0291 | -- | 0.02902 | 28 | 16.1 | -- |
| 136.72 | 0.545 | 2.86 | -- | 0.147 | 3.02 | -- | -- | 0.0507 | 22 | 0.05238 | 28 | 16.2 | -- |
| 154.6 | 0.581 | 2.87 | -0.145 | -- | -- | -- | -- | -0.00969 | -- | -- | -- | -- | -- |
| 153.84 | 0.58 | 2.87 | -- | 0.146 | -- | -- | -- | 0.00422 | 1.01 | -- | -- | -- | -- |
| 137.95 | 0.547 | 2.86 | -- | -- | 2.98 | -- | -- | 0.0502 | -- | 0.02632 | 28 | 16.2 | -- |
| 155.16 | 0.581 | 2.87 | -- | -- | -- | -- | -- | 0.00644 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 115.63 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 17 | 121.25 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 1 |
| 21 | 124.08 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 3 |
| 26 | 125.29 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 1 |
| 42 | 129.03 | wind | 1 | 30 | < th | dose dependent | rect. | 5 | 22 |
| 57 | 130.58 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 13 |
| 87 | 133.46 | wind | 1 | 30 | < th | dose dependent | sin | 0 | NA |
| 118 | 137.96 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 6 |
| 143 | 139.41 | wind | 1 | 30 | < th | dose independent | sin | 1 | NA |
| 146 | 139.45 | wind | 1 | 30 | < th | dose dependent | rect. | 2 | 16 |
| 187 | 140.44 | wind | 1 | 30 | < th | dose independent | rect. | 5 | 22 |
| 212 | 141.28 | wind | 1 | 30 | < th | dose independent | rect. | 2 | 6 |
| 214 | 141.31 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 216 | 141.33 | atmosphere | 1005 | 720 | < th | dose dependent | rect. | 19 | 3 |
| 271 | 141.96 | wind | 1 | 30 | > th | dose independent | sin | 1 | NA |
| 297 | 142.86 | wind | 1 | 30 | < th | dose independent | rect. | 2 | 16 |
| 316 | 143.20 | atmosphere | 1005 | 90 | < th | dose dependent | rect. | 20 | 3 |
| 320 | 143.36 | wind | 1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 331 | 143.69 | humidity | 80 | 720 | > th | dose dependent | rect. | 12 | 1 |
| 333 | 143.72 | humidity | 80 | 720 | > th | dose independent | rect. | 12 | 1 |
| 358 | 143.92 | wind | 1 | 30 | < th | dose dependent | rect. | 13 | 19 |
| 380 | 143.96 | wind | 1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 426 | 144.04 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 19 | 10 |
| 465 | 144.11 | wind | 1 | 30 | < th | dose dependent | no | NA | NA |
| 507 | 144.35 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 13 | 18 |
| 512 | 144.38 | wind | 1 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 518 | 144.49 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 19 | 13 |
| 535 | 144.59 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 13 | 9 |
| 550 | 144.65 | wind | 1 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 559 | 144.71 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 3 | 15 |
| 561 | 144.73 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 15 | 3 |
| 563 | 144.73 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 10 | 15 |
| 608 | 144.86 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 3 | 22 |
| 617 | 144.88 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 12 | 16 |
| 621 | 144.90 | wind | 9 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 622 | 144.90 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 627 | 144.90 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 775 | 144.90 | wind | 9 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 776 | 144.90 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 781 | 144.90 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 939 | 144.93 | atmosphere | 1000 | 720 | > th | dose independent | sin | 17 | NA |
| 968 | 145.00 | atmosphere | 1000 | 720 | < th | dose independent | sin | 19 | NA |
| 993 | 145.05 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 12 | 23 |
| 1000 | 145.07 | atmosphere | 1000 | 720 | > th | dose independent | rect. | 13 | 12 |