Os09g0363500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0363500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.21 | 0.382 | 11.9 | 0.949 | 1 | 0.606 | -0.0689 | -0.472 | 0.706 | 14.8 | 16.61 | 21707 | -- | -- |
| 66.8 | 0.381 | 11.9 | 0.944 | 1 | 0.614 | -0.0922 | -- | 0.706 | 14.8 | 16.61 | 21718 | -- | -- |
| 66.22 | 0.379 | 11.9 | 0.947 | 1 | 0.607 | -- | -0.475 | 0.706 | 14.8 | 16.67 | 21711 | -- | -- |
| 66.78 | 0.381 | 11.9 | 0.913 | 1 | 0.615 | -- | -- | 0.704 | 14.9 | 16.91 | 21710 | -- | -- |
| 123.45 | 0.517 | 11.9 | 0.839 | -- | 0.672 | -- | -0.322 | 0.673 | -- | 27.83 | 19931 | -- | -- |
| 80.15 | 0.42 | 12 | 0.99 | 1.01 | -- | -0.0151 | -- | 0.483 | 14.8 | -- | -- | -- | -- |
| 80.15 | 0.419 | 12 | 0.99 | 1.01 | -- | -- | -- | 0.483 | 14.8 | -- | -- | -- | -- |
| 123.35 | 0.517 | 11.9 | 0.89 | -- | 0.635 | -- | -- | 0.66 | -- | 32.84 | 21402 | -- | -- |
| 78.97 | 0.414 | 12 | -- | 1 | 0.793 | -- | -- | 0.547 | 14.8 | 20 | 25111 | -- | -- |
| 139.06 | 0.551 | 12 | 0.947 | -- | -- | -- | -- | 0.457 | -- | -- | -- | -- | -- |
| 105.96 | 0.482 | 12 | -- | 0.989 | -- | -- | -- | 0.373 | 14.8 | -- | -- | -- | -- |
| 127.51 | 0.526 | 12 | -- | -- | 0.956 | -- | -- | 0.422 | -- | 49.83 | 22932 | -- | -- |
| 162.7 | 0.595 | 12 | -- | -- | -- | -- | -- | 0.352 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.90 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 2 | 63.00 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 3 | 63.11 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 4 | 63.14 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 5 | 63.14 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 2 | 6 |
| 7 | 63.72 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 30 | 65.36 | radiation | 2e+01 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 31 | 65.38 | radiation | 2e+01 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 48 | 65.51 | wind | 1e+00 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 52 | 65.63 | wind | 9e+00 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 56 | 65.73 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 57 | 65.75 | wind | 9e+00 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 62 | 65.85 | radiation | 2e+01 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 66 | 65.86 | radiation | 2e+01 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 70 | 65.88 | radiation | 2e+01 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 76 | 65.94 | radiation | 2e+01 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 108 | 66.14 | atmosphere | 1e+03 | 90 | > th | dose independent | rect. | 5 | 13 |
| 117 | 66.28 | wind | 9e+00 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 175 | 66.73 | wind | 1e+00 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 227 | 67.06 | radiation | 1e+01 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 247 | 67.10 | radiation | 3e+01 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 286 | 67.20 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 288 | 67.21 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 18 | 2 |
| 289 | 67.21 | radiation | 2e+01 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 291 | 67.21 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 18 | 2 |
| 293 | 67.22 | radiation | 4e+01 | 10 | < th | dose independent | rect. | 21 | 21 |
| 302 | 67.24 | radiation | 4e+01 | 14400 | < th | dose dependent | rect. | 2 | 7 |
| 352 | 67.34 | radiation | 2e+01 | 14400 | < th | dose independent | sin | 9 | NA |
| 411 | 67.54 | radiation | 1e+01 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 453 | 67.62 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 459 | 67.63 | humidity | 8e+01 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 505 | 67.71 | radiation | 4e+01 | 90 | < th | dose independent | rect. | 21 | 21 |
| 552 | 67.75 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 553 | 67.75 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 561 | 67.76 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 14 | 5 |
| 590 | 67.83 | radiation | 4e+01 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 594 | 67.84 | humidity | 8e+01 | 14400 | < th | dose dependent | rect. | 19 | 5 |
| 605 | 67.85 | radiation | 1e+01 | 720 | < th | dose independent | rect. | 5 | 2 |
| 634 | 67.87 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 666 | 67.90 | precipitation | 1e-01 | 43200 | > th | dose independent | rect. | 11 | 8 |
| 683 | 67.91 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 691 | 67.92 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 14 | 5 |
| 719 | 67.92 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 14 | 5 |
| 749 | 67.96 | precipitation | 1e-01 | 43200 | < th | dose independent | rect. | 11 | 8 |
| 756 | 67.96 | precipitation | 1e-01 | 43200 | < th | dose dependent | rect. | 11 | 8 |
| 790 | 67.98 | precipitation | 1e-01 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 794 | 67.99 | wind | 1e+00 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 800 | 68.00 | radiation | 4e+01 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 805 | 68.01 | humidity | 7e+01 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 856 | 68.04 | radiation | 1e+01 | 43200 | > th | dose independent | sin | 6 | NA |
| 895 | 68.09 | radiation | 1e+01 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 900 | 68.10 | radiation | 1e+01 | 720 | < th | dose independent | rect. | 20 | 11 |
| 968 | 68.16 | radiation | 1e+01 | 14400 | < th | dose independent | no | NA | NA |