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Os09g0363100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : CRS1/YhbY domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0177) R2 : 0.673
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.21 (0.0462) R2dC : 0.495 R2C : 0.457
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.568 (0.0371) R2dN8 : 0.216 R2N8 : 0.178
σ : 0.333
deviance : 50.65
__
_____
C
peak time of C : 18.4
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
33.72 0.273 11.6 0.079 1.2 0.568 -0.179 -1.46 -0.441 18.4 19.13 1680 -- --
34.94 0.275 11.6 0.039 1.17 0.883 -0.425 -- -0.435 18.3 18.69 3132 -- --
33.8 0.271 11.6 0.0825 1.2 0.571 -- -1.46 -0.441 18.4 19.15 1679 -- --
34.5 0.274 11.6 0.0227 1.19 0.94 -- -- -0.453 18.4 18.49 3129 -- --
105.94 0.479 11.6 0.0953 -- 0.94 -- -0.667 -0.433 -- 18 2900 -- --
46.49 0.32 11.6 -0.393 1.21 -- -0.265 -- -0.61 18.4 -- -- -- --
46.66 0.32 11.6 -0.389 1.21 -- -- -- -0.611 18.4 -- -- -- --
105.61 0.479 11.6 0.0521 -- 1.16 -- -- -0.457 -- 18 2837 -- --
34.54 0.274 11.6 -- 1.19 0.94 -- -- -0.449 18.4 18.5 3129 -- --
122.32 0.517 11.6 -0.42 -- -- -- -- -0.637 -- -- -- -- --
50.65 0.333 11.6 -- 1.21 -- -- -- -0.568 18.4 -- -- -- --
105.68 0.479 11.6 -- -- 1.15 -- -- -0.458 -- 18.09 2840 -- --
126.97 0.526 11.6 -- -- -- -- -- -0.59 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 31.56 temperature 20 14400 > th dose independent rect. 20 1
3 31.75 temperature 20 14400 < th dose independent rect. 20 2
35 32.95 wind 1 14400 > th dose independent rect. 24 2
86 33.67 wind 7 14400 < th dose independent rect. 19 1
92 33.72 wind 7 14400 > th dose independent rect. 19 1
95 33.74 wind 1 14400 < th dose independent rect. 24 2
99 33.75 wind 7 14400 > th dose dependent rect. 19 1
102 33.80 wind 7 14400 < th dose independent rect. 19 5
114 33.87 temperature 20 14400 > th dose independent sin 17 NA
116 33.88 wind 7 14400 > th dose dependent rect. 17 19
118 33.89 wind 7 14400 < th dose independent rect. 18 9
130 33.91 wind 9 14400 < th dose independent rect. 16 20
131 33.92 wind 7 14400 > th dose independent rect. 19 5
147 33.98 wind 9 14400 > th dose independent rect. 16 20
153 34.00 wind 7 14400 > th dose independent rect. 17 11
169 34.04 wind 9 14400 < th dose independent rect. 17 3
183 34.08 humidity 80 14400 > th dose dependent rect. 5 1
184 34.09 wind 3 43200 > th dose independent rect. 6 1
188 34.09 wind 7 14400 > th dose dependent rect. 17 11
189 34.10 wind 3 43200 < th dose independent rect. 6 1
210 34.13 wind 5 14400 > th dose dependent rect. 19 5
215 34.15 temperature 20 14400 < th dose independent sin 17 NA
222 34.17 humidity 80 43200 > th dose independent rect. 24 10
225 34.18 wind 1 43200 > th dose independent rect. 12 1
250 34.22 wind 7 14400 < th dose independent rect. 17 16
252 34.23 wind 9 14400 > th dose independent rect. 17 3
258 34.23 wind 5 43200 < th dose dependent rect. 6 1
286 34.28 wind 3 43200 > th dose independent rect. 5 10
296 34.29 wind 3 43200 < th dose independent rect. 5 10
297 34.29 wind 7 14400 > th dose independent rect. 17 16
306 34.30 temperature 25 14400 < th dose dependent rect. 10 1
308 34.30 wind 3 43200 < th dose dependent rect. 5 9
309 34.31 humidity 50 43200 > th dose independent rect. 5 3
313 34.31 wind 9 14400 > th dose independent rect. 20 15
320 34.32 humidity 60 43200 < th dose dependent rect. 21 12
339 34.35 wind 1 43200 < th dose independent rect. 12 1
352 34.36 wind 7 14400 < th dose independent sin 12 NA
358 34.36 humidity 60 43200 < th dose dependent rect. 24 9
396 34.40 wind 9 14400 < th dose independent rect. 20 15
416 34.42 humidity 80 43200 < th dose independent rect. 23 11
418 34.42 wind 3 43200 > th dose independent rect. 2 14
456 34.44 wind 1 43200 > th dose dependent rect. 6 1
476 34.46 wind 7 14400 > th dose independent sin 12 NA
490 34.47 wind 3 43200 > th dose independent sin 2 NA
529 34.49 wind 3 43200 < th dose independent sin 2 NA
543 34.50 wind 3 43200 < th dose independent rect. 5 7
605 34.53 wind 3 43200 > th dose independent rect. 18 21
611 34.54 wind 3 43200 > th dose independent rect. 6 6
636 34.55 wind 3 43200 > th dose independent rect. 20 20
638 34.55 wind 5 14400 > th dose dependent sin 11 NA
691 34.57 wind 3 43200 > th dose independent rect. 1 21
714 34.58 wind 9 43200 > th dose independent rect. 13 22
738 34.59 temperature 25 14400 < th dose dependent rect. 17 1
766 34.60 wind 3 43200 < th dose independent rect. 20 20
768 34.60 wind 3 43200 < th dose independent rect. 18 21
815 34.62 wind 9 43200 > th dose independent rect. 15 23
843 34.63 wind 3 43200 > th dose independent rect. 11 22
847 34.63 wind 3 43200 > th dose independent rect. 4 23
859 34.64 wind 3 43200 > th dose independent no NA NA
881 34.64 temperature 25 14400 < th dose dependent rect. 9 9
937 34.66 wind 9 43200 < th dose independent rect. 13 22
953 34.67 humidity 60 43200 < th dose independent rect. 21 12