Os09g0362500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M1, membrane alanine aminopeptidase family protein.
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Os09g0362500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M1, membrane alanine aminopeptidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.05 | 0.345 | 10.2 | 0.727 | 1.21 | -1.83 | 0.115 | 1.14 | 0.214 | 14.7 | 17.9 | 103 | -- | -- |
| 55.07 | 0.346 | 10.3 | 0.588 | 1.2 | -1.82 | 0.351 | -- | 0.169 | 14.6 | 17.81 | 112 | -- | -- |
| 54.07 | 0.342 | 10.2 | 0.743 | 1.21 | -1.83 | -- | 1.25 | 0.215 | 14.7 | 17.9 | 107 | -- | -- |
| 55.59 | 0.347 | 10.3 | 0.556 | 1.21 | -1.81 | -- | -- | 0.16 | 14.7 | 17.4 | 106 | -- | -- |
| 69.19 | 0.387 | 10.2 | 0.939 | -- | -1.44 | -- | 1.36 | 0.3 | -- | 19.2 | 1106 | -- | -- |
| 98.45 | 0.465 | 10.3 | 0.121 | 0.606 | -- | 0.195 | -- | -0.135 | 14.1 | -- | -- | -- | -- |
| 98.59 | 0.465 | 10.3 | 0.127 | 0.607 | -- | -- | -- | -0.133 | 14.1 | -- | -- | -- | -- |
| 71.42 | 0.394 | 10.3 | 0.57 | -- | -1.39 | -- | -- | 0.139 | -- | 18.3 | 1085 | -- | -- |
| 62.44 | 0.368 | 10.3 | -- | 1.12 | -1.57 | -- | -- | 0.0684 | 14.7 | 17.9 | 105 | -- | -- |
| 120.63 | 0.513 | 10.3 | 0.101 | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
| 99.01 | 0.465 | 10.3 | -- | 0.605 | -- | -- | -- | -0.147 | 14.1 | -- | -- | -- | -- |
| 78.72 | 0.413 | 10.3 | -- | -- | -1.17 | -- | -- | 0.0428 | -- | 20 | 1064 | -- | -- |
| 120.9 | 0.513 | 10.3 | -- | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 43.72 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 22 | 48.14 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 20 |
| 112 | 52.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 153 | 54.55 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 159 | 54.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 176 | 55.40 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 182 | 55.57 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 211 | 56.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 217 | 56.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 219 | 56.74 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 228 | 56.82 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 245 | 56.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 21 |
| 250 | 57.03 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 271 | 57.27 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 17 |
| 283 | 57.36 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 319 | 57.55 | temperature | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 322 | 57.55 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 379 | 57.85 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 8 |
| 408 | 57.98 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 466 | 58.24 | temperature | 20 | 270 | > th | dose dependent | sin | 10 | NA |
| 607 | 58.71 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 641 | 58.85 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 685 | 58.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 713 | 58.98 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 717 | 58.99 | temperature | 20 | 90 | > th | dose independent | rect. | 9 | 20 |
| 825 | 59.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 23 |
| 934 | 59.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 945 | 59.36 | temperature | 20 | 90 | > th | dose independent | rect. | 21 | 8 |
| 966 | 59.39 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 982 | 59.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 19 |