Os09g0361300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0361300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.66 | 0.334 | 10.9 | -0.435 | 0.463 | 0.774 | 0.119 | -0.0296 | 0.296 | 23.6 | 21.51 | 1016 | -- | -- |
| 50.66 | 0.332 | 10.9 | -0.426 | 0.461 | 0.775 | 0.109 | -- | 0.298 | 23.6 | 21.55 | 1006 | -- | -- |
| 50.71 | 0.332 | 10.9 | -0.427 | 0.462 | 0.773 | -- | 0.0207 | 0.297 | 23.7 | 21.5 | 1002 | -- | -- |
| 50.71 | 0.332 | 10.9 | -0.43 | 0.46 | 0.774 | -- | -- | 0.298 | 23.7 | 21.5 | 1002 | -- | -- |
| 62.75 | 0.369 | 10.8 | -0.413 | -- | 0.914 | -- | 0.155 | 0.279 | -- | 21.41 | 890 | -- | -- |
| 70.85 | 0.395 | 10.8 | -0.122 | 0.577 | -- | 0.0603 | -- | 0.524 | 23.6 | -- | -- | -- | -- |
| 70.86 | 0.394 | 10.8 | -0.125 | 0.577 | -- | -- | -- | 0.524 | 23.6 | -- | -- | -- | -- |
| 62.81 | 0.369 | 10.8 | -0.45 | -- | 0.899 | -- | -- | 0.276 | -- | 21.4 | 891 | -- | -- |
| 54.93 | 0.345 | 10.8 | -- | 0.463 | 0.673 | -- | -- | 0.367 | 23.6 | 21.6 | 882 | -- | -- |
| 91.79 | 0.448 | 10.8 | -0.108 | -- | -- | -- | -- | 0.531 | -- | -- | -- | -- | -- |
| 71.27 | 0.395 | 10.8 | -- | 0.576 | -- | -- | -- | 0.538 | 23.6 | -- | -- | -- | -- |
| 67.65 | 0.383 | 10.8 | -- | -- | 0.774 | -- | -- | 0.351 | -- | 21.5 | 877 | -- | -- |
| 92.1 | 0.448 | 10.8 | -- | -- | -- | -- | -- | 0.543 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.18 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 9 | 50.65 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 56 | 51.12 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 66 | 51.16 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 99 | 51.37 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 100 | 51.39 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 117 | 51.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 138 | 51.76 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 162 | 51.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 175 | 52.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 318 | 53.04 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 410 | 53.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 413 | 53.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 490 | 53.59 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 12 |
| 778 | 54.10 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 16 |
| 895 | 54.31 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 21 |
| 939 | 54.38 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 21 |
| 971 | 54.43 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |