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Os09g0359800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Arginine methyltransferase pam1 (Pam1).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0214) R2 : 0.829
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.6 (0.0553) R2dC : 0.83 R2C : 0.828
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0225 (0.0451) R2dN8 : 0.000121 R2N8 : -0.00174
σ : 0.404
deviance : 74.48
__
_____
C
peak time of C : 16.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.66 0.384 11.2 0.313 2.58 0.386 0.59 -0.593 0.146 16.7 19.51 1301 -- --
67.52 0.383 11.2 0.313 2.58 0.386 0.55 -- 0.146 16.7 19.5 1300 -- --
67.57 0.383 11.2 0.31 2.58 0.387 -- -0.552 0.144 16.7 19.62 1300 -- --
68.29 0.385 11.2 0.302 2.59 0.385 -- -- 0.139 16.7 19.67 1300 -- --
382.16 0.915 11.2 0.102 -- -0.793 -- -0.366 -0.00202 -- 19.62 1300 -- --
72.17 0.398 11.2 0.228 2.6 -- 0.58 -- 0.0453 16.6 -- -- -- --
73.07 0.4 11.2 0.232 2.6 -- -- -- 0.0483 16.6 -- -- -- --
158 0.585 11.3 1.08 -- -2.07 -- -- -0.563 -- 1.341 567 -- --
70.06 0.39 11.2 -- 2.57 0.356 -- -- 0.117 16.7 19.97 1325 -- --
433.84 0.973 11.2 0.131 -- -- -- -- -0.0201 -- -- -- -- --
74.48 0.404 11.2 -- 2.6 -- -- -- 0.0225 16.6 -- -- -- --
82.09 0.422 11.2 -- -- -2.73 -- -- -0.106 -- 0.2 590 -- --
434.3 0.973 11.2 -- -- -- -- -- -0.0346 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.76 wind 5.0 270 < th dose independent rect. 3 2
4 53.54 precipitation 0.1 270 < th dose independent rect. 3 2
5 53.54 precipitation 0.1 270 < th dose dependent rect. 3 2
8 53.69 humidity 50.0 270 > th dose dependent rect. 22 3
10 53.79 temperature 15.0 270 > th dose independent rect. 1 21
11 53.80 wind 9.0 270 < th dose independent rect. 5 22
12 53.82 atmosphere 1000.0 270 > th dose independent rect. 22 3
16 53.93 temperature 15.0 270 > th dose independent rect. 16 14
20 54.01 wind 9.0 270 < th dose dependent rect. 4 1
24 54.12 wind 9.0 270 < th dose dependent rect. 3 3
25 54.15 atmosphere 1015.0 270 < th dose independent rect. 1 21
26 54.16 humidity 50.0 30 > th dose dependent rect. 22 6
29 54.24 precipitation 0.1 270 < th dose independent rect. 6 21
30 54.24 atmosphere 995.0 270 > th dose dependent rect. 22 3
31 54.24 precipitation 0.1 270 < th dose dependent rect. 6 21
32 54.25 radiation 1.0 270 < th dose dependent rect. 4 1
34 54.29 wind 9.0 270 < th dose independent rect. 6 10
35 54.33 atmosphere 1000.0 30 > th dose independent rect. 23 5
40 54.37 temperature 10.0 270 > th dose independent rect. 3 3
42 54.37 temperature 30.0 270 < th dose independent rect. 3 3
43 54.37 humidity 50.0 270 > th dose independent rect. 3 3
46 54.37 atmosphere 995.0 270 > th dose independent rect. 3 3
47 54.37 atmosphere 1015.0 270 < th dose independent rect. 3 3
48 54.37 radiation 20.0 270 < th dose independent rect. 3 3
51 54.37 temperature 10.0 270 > th dose independent rect. 6 21
70 54.41 radiation 30.0 270 < th dose dependent rect. 3 2
93 54.46 radiation 1.0 270 < th dose independent rect. 3 2
95 54.46 atmosphere 1015.0 270 < th dose independent rect. 2 19
105 54.53 temperature 15.0 270 > th dose independent rect. 2 19
112 54.54 precipitation 0.1 270 < th dose independent rect. 22 3
114 54.54 precipitation 0.1 270 < th dose dependent rect. 22 3
118 54.57 wind 7.0 270 < th dose independent rect. 22 3
121 54.60 temperature 10.0 270 > th dose independent rect. 22 3
122 54.60 temperature 30.0 270 < th dose independent rect. 22 3
123 54.60 humidity 50.0 270 > th dose independent rect. 22 3
127 54.60 radiation 1.0 270 < th dose independent rect. 22 3
132 54.60 radiation 20.0 270 < th dose independent rect. 16 14
134 54.60 radiation 1.0 270 < th dose dependent rect. 22 3
140 54.67 precipitation 0.1 30 < th dose independent rect. 8 20
141 54.67 radiation 40.0 270 < th dose dependent rect. 16 14
142 54.67 precipitation 0.1 30 < th dose dependent rect. 8 20
150 54.78 precipitation 0.1 270 < th dose independent rect. 6 10
151 54.78 precipitation 0.1 270 < th dose dependent rect. 6 10
152 54.79 atmosphere 1000.0 270 > th dose independent rect. 23 1
155 54.80 temperature 10.0 270 > th dose independent rect. 6 10
156 54.80 atmosphere 1015.0 270 < th dose independent rect. 6 10
158 54.80 radiation 40.0 270 < th dose independent rect. 16 14
170 54.88 humidity 60.0 270 > th dose dependent rect. 23 1
172 54.89 wind 9.0 90 < th dose independent rect. 22 6
173 54.89 wind 9.0 30 < th dose dependent rect. 4 5
174 54.90 temperature 10.0 90 > th dose independent rect. 22 6
175 54.90 temperature 30.0 90 < th dose independent rect. 22 6
176 54.90 humidity 50.0 90 > th dose independent rect. 22 6
180 54.90 radiation 1.0 90 < th dose independent rect. 22 6
185 54.90 temperature 10.0 90 > th dose independent rect. 4 18
186 54.90 atmosphere 1015.0 90 < th dose independent rect. 4 18
187 54.90 radiation 1.0 90 < th dose dependent rect. 22 6
192 54.91 precipitation 0.1 270 < th dose independent rect. 21 5
193 54.91 precipitation 0.1 270 < th dose dependent rect. 21 5
195 54.93 wind 9.0 30 < th dose independent rect. 8 20
221 55.00 wind 9.0 270 < th dose dependent rect. 22 3
225 55.02 precipitation 0.1 270 < th dose independent rect. 1 21
226 55.02 precipitation 0.1 270 < th dose dependent rect. 1 21
230 55.04 precipitation 0.1 30 < th dose independent rect. 4 4
231 55.04 precipitation 0.1 30 < th dose dependent rect. 4 4
285 55.12 temperature 10.0 30 > th dose independent rect. 4 4
287 55.12 temperature 30.0 30 < th dose independent rect. 4 4
288 55.12 humidity 50.0 30 > th dose independent rect. 4 4
290 55.12 atmosphere 995.0 30 > th dose independent rect. 4 4
291 55.12 atmosphere 1015.0 30 < th dose independent rect. 4 4
293 55.12 temperature 10.0 30 > th dose independent rect. 8 20
303 55.15 precipitation 0.1 270 < th dose independent rect. 2 19
306 55.15 precipitation 0.1 270 < th dose dependent rect. 2 19
322 55.18 wind 9.0 270 < th dose independent rect. 16 14
324 55.18 atmosphere 995.0 30 > th dose dependent rect. 23 5
372 55.25 temperature 10.0 270 > th dose dependent rect. 3 3
382 55.30 radiation 40.0 30 < th dose independent rect. 4 4
405 55.31 radiation 1.0 270 < th dose dependent rect. 3 16
444 55.38 humidity 50.0 270 > th dose dependent rect. 4 1
446 55.39 atmosphere 995.0 270 > th dose dependent rect. 23 1
474 55.43 atmosphere 995.0 270 > th dose independent rect. 16 14
476 55.43 atmosphere 995.0 270 > th dose dependent rect. 21 5
485 55.48 wind 9.0 30 < th dose independent rect. 4 19
492 55.53 temperature 10.0 270 > th dose dependent rect. 4 1
495 55.54 wind 9.0 30 < th dose dependent rect. 22 6
506 55.56 humidity 50.0 270 > th dose independent rect. 6 9
513 55.62 temperature 15.0 270 > th dose independent rect. 24 23
528 55.66 atmosphere 995.0 270 > th dose independent rect. 6 10
529 55.66 precipitation 0.1 10 < th dose independent rect. 4 19
530 55.66 wind 9.0 270 < th dose independent rect. 1 21
531 55.66 precipitation 0.1 10 < th dose dependent rect. 4 19
545 55.67 atmosphere 995.0 270 > th dose dependent rect. 4 1
559 55.71 precipitation 0.1 270 < th dose independent rect. 16 14
561 55.71 precipitation 0.1 270 < th dose dependent rect. 16 14
566 55.76 wind 9.0 270 < th dose independent rect. 2 19
568 55.77 radiation 40.0 270 < th dose dependent rect. 2 5
574 55.83 precipitation 0.1 270 < th dose independent rect. 23 1
577 55.83 precipitation 0.1 270 < th dose dependent rect. 23 1
579 55.85 wind 7.0 270 < th dose independent rect. 23 1
581 55.85 temperature 10.0 270 > th dose independent rect. 23 1
582 55.85 temperature 30.0 270 < th dose independent rect. 23 1
583 55.85 humidity 50.0 270 > th dose independent rect. 23 1
587 55.85 radiation 1.0 270 < th dose independent rect. 23 1
595 55.85 radiation 1.0 270 < th dose dependent rect. 23 1
602 55.87 wind 9.0 270 < th dose dependent rect. 23 1
633 55.93 atmosphere 995.0 270 > th dose independent rect. 2 18
648 56.01 temperature 10.0 30 > th dose dependent rect. 4 4
651 56.03 radiation 1.0 270 < th dose dependent rect. 2 18
660 56.06 temperature 30.0 30 < th dose dependent rect. 22 6
662 56.07 atmosphere 995.0 30 > th dose independent rect. 4 19
663 56.07 atmosphere 1000.0 90 > th dose dependent rect. 3 5
664 56.07 wind 9.0 270 < th dose dependent rect. 20 6
710 56.17 radiation 1.0 270 < th dose independent rect. 3 16
719 56.20 radiation 1.0 270 < th dose independent rect. 2 18
720 56.20 radiation 30.0 270 < th dose dependent rect. 2 7
724 56.22 wind 1.0 270 > th dose independent rect. 3 2
734 56.25 atmosphere 995.0 30 > th dose independent rect. 8 20
743 56.28 temperature 30.0 270 < th dose dependent rect. 22 3
744 56.28 radiation 1.0 270 < th dose dependent rect. 3 6
909 56.63 atmosphere 1010.0 270 < th dose independent rect. 15 15
948 56.77 temperature 10.0 1440 > th dose independent rect. 24 5
951 56.77 temperature 30.0 1440 < th dose independent rect. 24 5
955 56.77 humidity 50.0 1440 > th dose independent rect. 24 5
964 56.77 atmosphere 995.0 1440 > th dose independent rect. 24 5
965 56.77 radiation 20.0 1440 < th dose independent rect. 24 5
977 56.77 temperature 10.0 1440 > th dose independent rect. 5 19