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Os09g0359500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.55 (0.0948) R2 : 0.794
β1 : 2.4 (0.493) R2dD : 0.0396 R2D : 0.179
β2 : 3.82 (0.177) R2dC : 0.221 R2C : 0.0874
β3 : -6.43 (0.263) R2dE : 0.379 R2E : 0.431
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 8.02 (1.45) R2dD*E : 0.0503 R2D*E : 0.177
γ1 : 0.44 (0.199) R2dN8 : 0.00504 R2N8 : 0.0181
σ : 1.33
deviance : 818.18
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C
peak time of C : 14
E
wheather : temperature
threshold : 25.02
memory length : 4749
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 5.93
open length of G : 6.15

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
818.89 1.34 8.55 2.39 3.81 -6.43 0.207 7.89 0.427 14 25 4745 5.94 6.25
847.48 1.36 8.4 4.16 3.65 -6.19 0.0957 -- 0.525 14.2 25.09 6123 7.22 4.82
818.18 1.33 8.55 2.4 3.82 -6.43 -- 8.02 0.44 14 25.02 4749 5.93 6.15
844.71 1.35 8.35 4.28 3.6 -5.95 -- -- 0.495 14.1 25.1 6124 7.13 4.8
1478.86 1.79 8.64 1.68 -- -5.45 -- 8.09 0.377 -- 25.16 4310 6.18 6.65
1874.34 2.03 7.95 7.45 2.9 -- 1.73 -- 2.32 14.5 -- -- -- --
1885.11 2.03 7.94 7.49 2.91 -- -- -- 2.33 14.5 -- -- -- --
1493.59 1.8 8.29 4.01 -- -5.07 -- -- 0.372 -- 25 7141 6.98 5.18
896.8 1.39 8.4 -- 2.98 -7.18 -- -- -0.522 14.2 24.8 24610 10.8 4.65
2381.43 2.28 7.96 7.37 -- -- -- -- 2.25 -- -- -- -- --
3365.31 2.71 8.13 -- 2.76 -- -- -- 1.49 14.5 -- -- -- --
1338.4 1.7 8.71 -- -- -7.94 -- -- -1.03 -- 23.59 31235 11.8 5.6
3814.48 2.88 8.15 -- -- -- -- -- 1.44 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 716.99 humidity 90 43200 > th dose independent rect. 22 1
2 720.02 humidity 90 43200 > th dose independent rect. 18 6
3 720.51 humidity 90 43200 > th dose dependent rect. 22 1
4 720.93 humidity 90 43200 > th dose independent rect. 20 4
8 724.15 humidity 90 43200 < th dose independent rect. 18 1
12 725.94 humidity 90 43200 > th dose dependent rect. 20 4
15 727.39 humidity 80 43200 < th dose independent rect. 12 2
23 730.64 humidity 80 43200 > th dose independent rect. 12 3
25 730.80 humidity 90 43200 > th dose dependent rect. 18 7
52 737.59 humidity 80 43200 > th dose independent rect. 14 1
77 743.51 humidity 90 43200 > th dose dependent sin 16 NA
90 746.01 humidity 90 43200 > th dose independent rect. 18 1
104 748.03 humidity 90 43200 > th dose independent sin 16 NA
120 750.90 humidity 90 43200 < th dose independent rect. 17 8
139 752.85 humidity 90 43200 > th dose dependent rect. 15 17
274 761.14 radiation 1 14400 > th dose independent rect. 18 11
275 761.14 humidity 90 43200 > th dose dependent rect. 2 23
278 761.23 radiation 1 14400 > th dose independent rect. 18 1
294 761.72 humidity 90 43200 > th dose dependent rect. 5 23
298 761.87 humidity 90 43200 > th dose dependent no NA NA
316 762.71 humidity 90 43200 > th dose dependent rect. 20 23
344 764.16 humidity 90 43200 > th dose independent rect. 16 16
345 764.16 humidity 90 43200 > th dose independent rect. 16 18
373 765.46 humidity 90 43200 < th dose independent rect. 21 2
374 765.47 humidity 70 43200 > th dose dependent rect. 14 1
400 766.65 radiation 1 43200 < th dose dependent rect. 2 3
433 768.04 radiation 1 14400 < th dose independent rect. 18 11
457 768.96 humidity 90 43200 < th dose independent sin 17 NA
527 772.49 radiation 1 14400 < th dose independent rect. 18 1
532 772.69 humidity 90 43200 > th dose independent rect. 2 23
534 772.70 radiation 1 14400 < th dose independent rect. 18 6
573 774.30 radiation 1 43200 < th dose dependent rect. 18 1
580 774.61 radiation 1 43200 < th dose dependent rect. 18 4
602 775.23 humidity 90 43200 > th dose independent no NA NA
617 775.88 radiation 1 43200 < th dose dependent rect. 18 10
644 777.68 humidity 90 43200 > th dose independent rect. 20 23
647 777.89 humidity 90 43200 < th dose independent rect. 10 15
655 778.43 humidity 90 43200 < th dose independent rect. 9 18
692 781.32 radiation 1 43200 < th dose dependent rect. 21 8
772 786.41 radiation 1 43200 < th dose dependent rect. 18 21
787 787.58 radiation 1 43200 < th dose dependent rect. 18 14
809 789.34 humidity 90 43200 > th dose dependent rect. 2 8
814 789.73 humidity 80 43200 > th dose dependent rect. 17 1
828 791.03 humidity 90 43200 > th dose dependent rect. 3 5
854 792.51 radiation 1 43200 < th dose dependent rect. 6 23
858 792.70 temperature 20 43200 < th dose independent rect. 21 2
892 794.48 humidity 90 43200 < th dose independent rect. 16 19
896 794.55 humidity 80 43200 > th dose dependent rect. 10 9
898 794.61 radiation 1 43200 < th dose dependent rect. 6 2
904 795.01 temperature 20 43200 > th dose independent rect. 21 2
929 796.46 radiation 1 43200 < th dose dependent rect. 6 13
935 796.57 radiation 1 43200 < th dose dependent rect. 6 17
949 797.00 atmosphere 1005 43200 > th dose independent rect. 16 1