Os09g0357300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0357300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.75 | 0.314 | 9.22 | -1.4 | 0.295 | -0.222 | 0.0849 | -1.28 | -0.133 | 15.5 | 68.97 | 4435 | -- | -- |
| 46.59 | 0.318 | 9.23 | -1.38 | 0.28 | -0.317 | -0.0301 | -- | -0.156 | 15.9 | 66.08 | 5476 | -- | -- |
| 44.77 | 0.312 | 9.22 | -1.39 | 0.296 | -0.224 | -- | -1.27 | -0.132 | 15.5 | 69 | 4434 | -- | -- |
| 46.54 | 0.318 | 9.23 | -1.38 | 0.28 | -0.358 | -- | -- | -0.155 | 15.8 | 67 | 5476 | -- | -- |
| 49.26 | 0.327 | 9.23 | -1.38 | -- | -0.275 | -- | -1.12 | -0.136 | -- | 68.97 | 5523 | -- | -- |
| 48.51 | 0.327 | 9.22 | -1.35 | 0.301 | -- | 0.0782 | -- | -0.132 | 15.5 | -- | -- | -- | -- |
| 48.53 | 0.326 | 9.22 | -1.35 | 0.301 | -- | -- | -- | -0.131 | 15.5 | -- | -- | -- | -- |
| 50.93 | 0.332 | 9.23 | -1.4 | -- | -0.419 | -- | -- | -0.163 | -- | 66.95 | 5477 | -- | -- |
| 94.63 | 0.453 | 9.19 | -- | 0.25 | -0.267 | -- | -- | -0.0331 | 15.4 | 68 | 2478 | -- | -- |
| 53.6 | 0.342 | 9.22 | -1.37 | -- | -- | -- | -- | -0.139 | -- | -- | -- | -- | -- |
| 96.77 | 0.46 | 9.19 | -- | 0.328 | -- | -- | -- | 0.0192 | 15.5 | -- | -- | -- | -- |
| 98.54 | 0.462 | 9.18 | -- | -- | -0.383 | -- | -- | 0.0536 | -- | 71 | 2498 | -- | -- |
| 102.79 | 0.473 | 9.19 | -- | -- | -- | -- | -- | 0.0121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 41.53 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 12 | 1 |
| 3 | 41.89 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 10 |
| 9 | 41.98 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 12 | 42.05 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 24 | 42.13 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 32 | 42.16 | wind | 3.0 | 1440 | < th | dose independent | rect. | 12 | 1 |
| 35 | 42.18 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 36 | 42.18 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 2 |
| 38 | 42.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 2 |
| 60 | 42.35 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 62 | 42.35 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 68 | 42.39 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 11 |
| 73 | 42.40 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 78 | 42.41 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 14 |
| 81 | 42.43 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 91 | 42.45 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 100 | 42.48 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 115 | 42.53 | wind | 3.0 | 14400 | < th | dose independent | sin | 9 | NA |
| 124 | 42.54 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 125 | 42.54 | wind | 3.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 139 | 42.58 | wind | 3.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 192 | 42.70 | wind | 3.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 212 | 42.74 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 213 | 42.74 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 220 | 42.76 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 8 |
| 252 | 42.82 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 256 | 42.82 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 268 | 42.84 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 8 |
| 270 | 42.84 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 271 | 42.84 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 10 |
| 278 | 42.84 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 10 |
| 289 | 42.86 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 294 | 42.87 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 302 | 42.88 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 325 | 42.91 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 389 | 43.00 | wind | 1.0 | 1440 | < th | dose independent | rect. | 12 | 7 |
| 417 | 43.03 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 7 |
| 425 | 43.04 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 12 | 7 |
| 450 | 43.07 | wind | 1.0 | 14400 | > th | dose independent | rect. | 6 | 6 |
| 484 | 43.10 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 506 | 43.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 13 |
| 513 | 43.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 13 |
| 519 | 43.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 13 |
| 541 | 43.17 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 548 | 43.17 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 571 | 43.20 | wind | 1.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 589 | 43.21 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 678 | 43.28 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 702 | 43.31 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 708 | 43.31 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 724 | 43.33 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 7 |
| 731 | 43.34 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 7 |
| 888 | 43.48 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 943 | 43.53 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 10 |
| 954 | 43.54 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |