Os09g0356200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Serine/threonine protein kinase domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0356200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Serine/threonine protein kinase domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 177.05 | 0.625 | 10.1 | 0.0894 | 1.22 | -4.65 | -1 | -6.81 | 0.881 | 14.5 | 0.6895 | 1422 | -- | -- |
| 192.44 | 0.646 | 10.2 | -0.491 | 1.24 | -3.03 | -1.22 | -- | 0.802 | 14.3 | 1.348 | 1402 | -- | -- |
| 180.02 | 0.625 | 10.1 | 0.0605 | 1.26 | -4.62 | -- | -6.62 | 0.883 | 14.2 | 0.6881 | 1414 | -- | -- |
| 198.6 | 0.656 | 10.2 | -0.52 | 1.25 | -3.07 | -- | -- | 0.79 | 14.1 | 1.493 | 1398 | -- | -- |
| 223.3 | 0.696 | 10.1 | 0.00367 | -- | -4.7 | -- | -6.3 | 0.797 | -- | 0.5775 | 3044 | -- | -- |
| 304.17 | 0.818 | 10.1 | 0.204 | 1.03 | -- | -1.75 | -- | 1.19 | 15 | -- | -- | -- | -- |
| 314.45 | 0.83 | 10.1 | 0.164 | 1.02 | -- | -- | -- | 1.18 | 14.9 | -- | -- | -- | -- |
| 206.84 | 0.67 | 10.2 | -0.472 | -- | -3.54 | -- | -- | 0.714 | -- | 1.411 | 3122 | -- | -- |
| 204.39 | 0.666 | 10.2 | -- | 1.3 | -2.79 | -- | -- | 0.867 | 14 | 2.03 | 1388 | -- | -- |
| 374.39 | 0.904 | 10.1 | 0.121 | -- | -- | -- | -- | 1.15 | -- | -- | -- | -- | -- |
| 315.16 | 0.83 | 10.1 | -- | 1.02 | -- | -- | -- | 1.16 | 14.9 | -- | -- | -- | -- |
| 211.36 | 0.677 | 10.2 | -- | -- | -3.36 | -- | -- | 0.757 | -- | 2.029 | 3136 | -- | -- |
| 374.78 | 0.904 | 10.1 | -- | -- | -- | -- | -- | 1.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 167.31 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 5 | 168.22 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 15 | 168.45 | radiation | 1 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 16 | 168.90 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 18 | 169.02 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 21 | 169.27 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 24 | 169.31 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 5 |
| 31 | 169.43 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 9 |
| 35 | 169.59 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 39 | 169.67 | radiation | 1 | 1440 | < th | dose dependent | rect. | 13 | 17 |
| 40 | 169.68 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 44 | 169.95 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 46 | 169.98 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 48 | 169.99 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 58 | 170.21 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 118 | 173.06 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 16 |
| 133 | 173.37 | radiation | 1 | 43200 | < th | dose dependent | sin | 15 | NA |
| 142 | 173.63 | radiation | 1 | 43200 | < th | dose dependent | rect. | 8 | 21 |
| 149 | 173.73 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 6 |
| 152 | 173.74 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 10 |
| 165 | 173.86 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 21 |
| 212 | 174.28 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 215 | 174.29 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 16 |
| 236 | 174.40 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 9 |
| 239 | 174.41 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 13 |
| 335 | 175.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 336 | 175.10 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 17 |
| 341 | 175.11 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 19 |
| 342 | 175.11 | radiation | 1 | 43200 | < th | dose dependent | rect. | 2 | 21 |
| 352 | 175.13 | humidity | 90 | 43200 | > th | dose dependent | sin | 15 | NA |
| 367 | 175.15 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 21 |
| 378 | 175.17 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 420 | 175.72 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 423 | 175.82 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 432 | 176.04 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 8 |
| 436 | 176.15 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 437 | 176.16 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 439 | 176.18 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 452 | 176.36 | temperature | 20 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 469 | 176.44 | radiation | 1 | 1440 | > th | dose independent | rect. | 8 | 22 |
| 471 | 176.45 | temperature | 20 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 487 | 176.58 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 18 |
| 516 | 176.85 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 519 | 176.92 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 539 | 177.04 | wind | 9 | 43200 | > th | dose independent | rect. | 11 | 20 |
| 602 | 177.28 | radiation | 1 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 623 | 177.38 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 625 | 177.38 | radiation | 1 | 43200 | < th | dose dependent | rect. | 22 | 17 |
| 632 | 177.42 | radiation | 1 | 1440 | < th | dose independent | rect. | 8 | 22 |
| 639 | 177.45 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 648 | 177.48 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 651 | 177.49 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 657 | 177.52 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 662 | 177.53 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 11 |
| 691 | 177.63 | radiation | 1 | 1440 | > th | dose independent | rect. | 13 | 17 |
| 702 | 177.65 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 13 |
| 714 | 177.68 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 726 | 177.71 | wind | 7 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 768 | 177.83 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 11 |
| 814 | 177.92 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 843 | 177.97 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 908 | 178.11 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 16 |
| 919 | 178.14 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 929 | 178.16 | radiation | 1 | 1440 | < th | dose dependent | sin | 13 | NA |
| 943 | 178.20 | temperature | 20 | 43200 | < th | dose independent | sin | 9 | NA |
| 980 | 178.25 | radiation | 1 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 989 | 178.28 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 23 |