Os09g0353700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 2OG-Fe(II) oxygenase domain containing protein.
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Os09g0353700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 2OG-Fe(II) oxygenase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.75 | 0.501 | 3.17 | -0.827 | 0.262 | -0.331 | -0.886 | 0.945 | -0.0801 | 3.43 | 18.7 | 508 | -- | -- |
| 114.23 | 0.498 | 3.18 | -0.808 | 0.268 | -0.63 | -0.984 | -- | -0.123 | 3.21 | 18.52 | 326 | -- | -- |
| 115.82 | 0.501 | 3.17 | -0.833 | 0.229 | -0.272 | -- | 1.11 | -0.0778 | 3.39 | 18.5 | 754 | -- | -- |
| 116.92 | 0.504 | 3.15 | -0.766 | 0.278 | -0.627 | -- | -- | -0.0569 | 3.05 | 18.56 | 331 | -- | -- |
| 118.81 | 0.508 | 3.17 | -0.838 | -- | -0.323 | -- | 1.06 | -0.0801 | -- | 18.5 | 874 | -- | -- |
| 119.34 | 0.512 | 3.14 | -0.602 | 0.252 | -- | -0.803 | -- | -0.00148 | 2.88 | -- | -- | -- | -- |
| 121.53 | 0.516 | 3.13 | -0.584 | 0.249 | -- | -- | -- | 0.00326 | 2.9 | -- | -- | -- | -- |
| 120.38 | 0.511 | 3.15 | -0.76 | -- | -0.582 | -- | -- | -0.0629 | -- | 18.54 | 857 | -- | -- |
| 129.68 | 0.533 | 3.12 | -- | 0.255 | -0.213 | -- | -- | 0.0559 | 2.74 | 18.56 | 331 | -- | -- |
| 125.12 | 0.523 | 3.13 | -0.573 | -- | -- | -- | -- | 0.00969 | -- | -- | -- | -- | -- |
| 130.52 | 0.534 | 3.12 | -- | 0.238 | -- | -- | -- | 0.0683 | 2.88 | -- | -- | -- | -- |
| 133.08 | 0.537 | 3.12 | -- | -- | -0.231 | -- | -- | 0.0562 | -- | 18.1 | 888 | -- | -- |
| 133.79 | 0.54 | 3.12 | -- | -- | -- | -- | -- | 0.0733 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.51 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 2 | 110.32 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 3 | 112.90 | temperature | 25.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 6 | 113.08 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 7 | 113.16 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 9 | 113.18 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 10 | 113.22 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 1 |
| 14 | 113.31 | wind | 7.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 16 | 113.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 19 | 113.31 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 23 | 113.31 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 32 | 113.31 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 33 | 113.31 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 34 | 113.31 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 43 | 113.31 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 46 | 113.33 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 48 | 113.34 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 23 | 12 |
| 51 | 113.36 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 1 | 10 |
| 53 | 113.37 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 56 | 113.37 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 9 | 2 |
| 59 | 113.38 | wind | 5.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 64 | 113.39 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 4 | 7 |
| 72 | 113.42 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 74 | 113.42 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 75 | 113.42 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 78 | 113.42 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 80 | 113.42 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 82 | 113.42 | radiation | 1.0 | 30 | < th | dose independent | rect. | 4 | 1 |
| 87 | 113.42 | temperature | 10.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 88 | 113.42 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 90 | 113.42 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 95 | 113.43 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 1 |
| 96 | 113.43 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 98 | 113.43 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 99 | 113.44 | wind | 1.0 | 30 | > th | dose independent | rect. | 4 | 1 |
| 113 | 113.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 114 | 113.50 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 1 |
| 120 | 113.57 | humidity | 90.0 | 720 | < th | dose independent | rect. | 17 | 1 |
| 125 | 113.63 | humidity | 70.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 143 | 113.65 | wind | 9.0 | 4320 | < th | dose independent | rect. | 2 | 9 |
| 145 | 113.65 | wind | 1.0 | 30 | > th | dose dependent | rect. | 4 | 1 |
| 152 | 113.66 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 5 | 23 |
| 160 | 113.71 | wind | 9.0 | 4320 | > th | dose independent | rect. | 4 | 7 |
| 165 | 113.73 | temperature | 20.0 | 720 | > th | dose independent | rect. | 14 | 8 |
| 172 | 113.75 | wind | 9.0 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 178 | 113.77 | wind | 9.0 | 4320 | > th | dose independent | rect. | 23 | 12 |
| 187 | 113.80 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 5 |
| 188 | 113.81 | wind | 9.0 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 190 | 113.82 | wind | 9.0 | 4320 | < th | dose independent | rect. | 5 | 6 |
| 200 | 113.87 | temperature | 20.0 | 720 | < th | dose independent | rect. | 16 | 6 |
| 209 | 113.92 | temperature | 20.0 | 720 | < th | dose independent | sin | 18 | NA |
| 212 | 113.93 | temperature | 20.0 | 720 | > th | dose independent | sin | 18 | NA |
| 219 | 113.95 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 18 |
| 222 | 113.96 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 16 |
| 229 | 113.99 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 12 |
| 233 | 114.00 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 14 |
| 240 | 114.02 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 5 | 23 |
| 242 | 114.02 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 262 | 114.06 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 9 | 1 |
| 279 | 114.08 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 6 | 7 |
| 300 | 114.11 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 304 | 114.12 | humidity | 70.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 305 | 114.12 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 325 | 114.14 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 386 | 114.24 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 399 | 114.27 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 8 | 3 |
| 409 | 114.28 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 413 | 114.30 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 422 | 114.31 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 5 | 8 |
| 426 | 114.31 | temperature | 20.0 | 30 | > th | dose independent | rect. | 8 | 22 |
| 428 | 114.32 | wind | 1.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 429 | 114.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 433 | 114.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 436 | 114.32 | radiation | 20.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 437 | 114.32 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 442 | 114.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 12 | 23 |
| 445 | 114.32 | wind | 1.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 448 | 114.32 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 449 | 114.33 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 461 | 114.34 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 6 | 6 |
| 511 | 114.42 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 522 | 114.42 | radiation | 10.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 523 | 114.42 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 8 | 3 |
| 524 | 114.43 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 534 | 114.43 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 586 | 114.47 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 12 | 21 |
| 587 | 114.48 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 610 | 114.48 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 14 | 19 |
| 618 | 114.49 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 628 | 114.50 | humidity | 90.0 | 270 | < th | dose independent | rect. | 1 | 1 |
| 659 | 114.53 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 671 | 114.54 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 5 | 11 |
| 710 | 114.57 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 743 | 114.60 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 10 | 1 |
| 761 | 114.61 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 19 | 6 |
| 780 | 114.63 | wind | 3.0 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 781 | 114.63 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 792 | 114.63 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 821 | 114.66 | temperature | 20.0 | 30 | > th | dose independent | rect. | 16 | 14 |
| 836 | 114.67 | wind | 5.0 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 881 | 114.72 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 890 | 114.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 893 | 114.73 | temperature | 30.0 | 30 | < th | dose independent | rect. | 10 | 1 |
| 894 | 114.73 | humidity | 50.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 900 | 114.73 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 10 | 1 |
| 932 | 114.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 11 | 23 |
| 935 | 114.73 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 10 | 1 |
| 969 | 114.75 | wind | 1.0 | 30 | > th | dose independent | rect. | 10 | 1 |
| 970 | 114.75 | atmosphere | 1010.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 977 | 114.75 | temperature | 20.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 982 | 114.76 | wind | 3.0 | 1440 | > th | dose independent | rect. | 6 | 2 |