Os09g0349700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0349700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 377.52 | 0.905 | 3.15 | -0.166 | 0.0186 | 2.72 | 0.822 | 6.22 | -0.344 | 17.9 | 0.5434 | 4 | -- | -- |
| 377.52 | 0.912 | 3.16 | -0.18 | 0.0187 | 4.51 | 0.822 | -- | -0.344 | 17.9 | 0.5434 | 4 | -- | -- |
| 379.11 | 0.907 | 3.15 | -0.173 | 0.0398 | 2.65 | -- | 6.12 | -0.341 | 21.6 | 0.5206 | 4 | -- | -- |
| 379.11 | 0.913 | 3.16 | -0.186 | 0.0396 | 4.4 | -- | -- | -0.341 | 21.6 | 0.7441 | 2 | -- | -- |
| 379.2 | 0.907 | 3.15 | -0.172 | -- | 2.59 | -- | 6.31 | -0.341 | -- | 0.5268 | 4 | -- | -- |
| 397.55 | 0.935 | 3.16 | -0.135 | 0.0103 | -- | -0.606 | -- | -0.351 | 6.25 | -- | -- | -- | -- |
| 398.29 | 0.935 | 3.16 | -0.144 | 0.0515 | -- | -- | -- | -0.35 | 0.853 | -- | -- | -- | -- |
| 379.2 | 0.911 | 3.16 | -0.186 | -- | 4.4 | -- | -- | -0.341 | -- | 0.7383 | 3 | -- | -- |
| 380.01 | 0.913 | 3.15 | -- | 0.0393 | 4.35 | -- | -- | -0.321 | 21.3 | 0.7441 | 2 | -- | -- |
| 398.46 | 0.933 | 3.16 | -0.142 | -- | -- | -- | -- | -0.349 | -- | -- | -- | -- | -- |
| 398.83 | 0.934 | 3.15 | -- | 0.0492 | -- | -- | -- | -0.334 | 0.723 | -- | -- | -- | -- |
| 380.1 | 0.911 | 3.15 | -- | -- | 4.35 | -- | -- | -0.321 | -- | 0.7301 | 5 | -- | -- |
| 398.99 | 0.932 | 3.15 | -- | -- | -- | -- | -- | -0.333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 363.80 | wind | 1.0 | 10 | < th | dose dependent | rect. | 22 | 2 |
| 3 | 367.15 | wind | 1.0 | 10 | < th | dose dependent | rect. | 17 | 7 |
| 19 | 369.37 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 23 | 369.47 | humidity | 50.0 | 90 | < th | dose independent | rect. | 12 | 2 |
| 25 | 369.63 | humidity | 50.0 | 90 | < th | dose dependent | rect. | 13 | 1 |
| 28 | 370.54 | wind | 1.0 | 10 | < th | dose dependent | rect. | 11 | 12 |
| 41 | 371.63 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 62 | 372.30 | humidity | 50.0 | 10 | < th | dose independent | rect. | 13 | 5 |
| 80 | 372.40 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 12 | 2 |
| 321 | 374.58 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 325 | 374.76 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 7 |
| 329 | 374.84 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 12 |
| 333 | 374.90 | humidity | 50.0 | 10 | < th | dose dependent | sin | 13 | NA |
| 335 | 374.93 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 7 |
| 364 | 375.15 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 17 |
| 373 | 375.21 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 1 | 17 |
| 428 | 375.53 | humidity | 50.0 | 10 | < th | dose independent | sin | 13 | NA |
| 429 | 375.53 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 5 |
| 434 | 375.56 | radiation | 40.0 | 90 | > th | dose independent | rect. | 12 | 1 |
| 485 | 375.82 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 3 |
| 498 | 375.93 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 575 | 376.11 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 607 | 376.30 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 12 | 2 |
| 608 | 376.30 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 3 |
| 613 | 376.36 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 3 |
| 621 | 376.40 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 8 |
| 624 | 376.40 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 15 |
| 629 | 376.41 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 3 | NA |
| 661 | 376.51 | precipitation | 0.1 | 10 | < th | dose independent | sin | 3 | NA |
| 662 | 376.51 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 3 | NA |
| 663 | 376.52 | wind | 3.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 683 | 376.59 | precipitation | 0.1 | 10 | > th | dose independent | sin | 3 | NA |
| 694 | 376.62 | humidity | 50.0 | 10 | > th | dose independent | sin | 13 | NA |
| 762 | 376.89 | humidity | 50.0 | 30 | < th | dose dependent | sin | 7 | NA |
| 837 | 377.11 | wind | 3.0 | 10 | > th | dose independent | rect. | 4 | 1 |
| 842 | 377.11 | wind | 3.0 | 10 | > th | dose dependent | rect. | 4 | 1 |
| 862 | 377.16 | atmosphere | 1005.0 | 90 | < th | dose independent | rect. | 9 | 5 |
| 916 | 377.24 | wind | 1.0 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 917 | 377.26 | wind | 1.0 | 10 | < th | dose independent | rect. | 17 | 7 |