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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0349600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein kinase-like domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.97 (0.0191) R2 : 0.00574
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0652 (0.0402) R2dN8 : 0.00741 R2N8 : 0.00574
σ : 0.359
deviance : 59.26
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.64 0.341 3 0.0721 0.0055 2.69 -0.235 5.29 0.0806 3.21 17.08 586 -- --
58.09 0.358 2.97 0.0502 0.0654 0.244 0.392 -- 0.0741 12.4 17.08 586 -- --
52.82 0.338 3 0.0773 0.00748 2.72 -- 5.4 0.0808 3.28 17.09 586 -- --
57.91 0.354 2.97 0.123 0.0525 0.397 -- -- 0.0933 10.8 19.25 685 -- --
52.82 0.338 3 0.0753 -- 2.74 -- 5.45 0.0815 -- 17.09 585 -- --
58.28 0.358 2.97 0.0316 0.0648 -- 0.396 -- 0.0692 12.4 -- -- -- --
58.89 0.359 2.97 0.046 0.0723 -- -- -- 0.0704 10.4 -- -- -- --
58.04 0.355 2.96 0.123 -- 0.41 -- -- 0.101 -- 19.53 697 -- --
58.19 0.355 2.97 -- 0.06 0.354 -- -- 0.08 10.1 18.4 611 -- --
59.21 0.36 2.97 0.0447 -- -- -- -- 0.0701 -- -- -- -- --
58.94 0.359 2.97 -- 0.072 -- -- -- 0.0653 10.4 -- -- -- --
58.38 0.356 2.97 -- -- 0.375 -- -- 0.0786 -- 18.51 617 -- --
59.26 0.359 2.97 -- -- -- -- -- 0.0652 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.90 wind 9.0 4320 < th dose independent rect. 3 1
2 52.74 temperature 20.0 1440 < th dose dependent rect. 12 1
3 52.82 temperature 20.0 1440 < th dose independent rect. 12 1
4 52.85 wind 9.0 4320 > th dose independent rect. 3 1
36 52.85 wind 9.0 4320 > th dose dependent rect. 3 1
70 52.99 temperature 20.0 1440 > th dose independent rect. 12 1
71 53.07 temperature 20.0 1440 > th dose independent rect. 17 1
72 53.08 temperature 20.0 1440 < th dose independent rect. 17 1
79 53.18 temperature 20.0 1440 < th dose independent rect. 12 6
83 53.23 temperature 20.0 1440 > th dose independent rect. 12 6
86 53.28 humidity 90.0 1440 > th dose dependent rect. 11 2
87 53.31 humidity 90.0 1440 > th dose independent rect. 11 2
91 53.32 temperature 20.0 1440 < th dose dependent rect. 19 1
92 53.33 wind 1.0 270 < th dose dependent rect. 7 7
100 53.40 wind 1.0 720 < th dose dependent rect. 8 1
104 53.45 humidity 90.0 1440 < th dose independent rect. 11 2
109 53.51 wind 1.0 270 < th dose dependent rect. 7 12
122 53.63 humidity 70.0 4320 > th dose independent rect. 21 1
125 53.63 temperature 20.0 1440 < th dose dependent rect. 12 8
127 53.66 temperature 20.0 720 < th dose dependent rect. 7 1
140 53.80 wind 1.0 30 < th dose independent rect. 2 1
144 53.82 temperature 20.0 10 > th dose dependent rect. 2 1
148 53.84 wind 3.0 30 < th dose dependent rect. 2 1
150 53.86 temperature 20.0 30 > th dose independent rect. 2 1
154 53.89 humidity 90.0 30 > th dose independent rect. 2 1
155 53.89 atmosphere 1005.0 30 > th dose independent rect. 2 1
165 53.92 humidity 50.0 10 > th dose independent rect. 3 23
166 53.92 humidity 70.0 30 > th dose dependent rect. 2 1
168 53.92 atmosphere 1000.0 30 > th dose dependent rect. 2 1
179 53.95 temperature 10.0 30 > th dose independent rect. 2 1
181 53.95 temperature 30.0 30 < th dose independent rect. 2 1
182 53.95 humidity 50.0 30 > th dose independent rect. 2 1
186 53.95 atmosphere 1010.0 30 < th dose independent rect. 2 1
188 53.95 radiation 1.0 30 < th dose independent rect. 2 1
193 53.95 precipitation 0.1 30 < th dose independent rect. 2 1
195 53.95 temperature 10.0 30 > th dose independent rect. 3 23
196 53.95 radiation 1.0 30 < th dose dependent rect. 2 1
201 53.95 precipitation 0.1 30 < th dose dependent rect. 2 1
203 53.96 temperature 20.0 720 < th dose dependent rect. 7 8
217 54.01 atmosphere 1015.0 30 < th dose dependent rect. 2 1
224 54.03 temperature 20.0 720 > th dose independent rect. 7 8
231 54.05 radiation 10.0 4320 < th dose dependent rect. 3 1
237 54.06 temperature 10.0 1440 > th dose independent rect. 3 1
240 54.06 temperature 30.0 1440 < th dose independent rect. 3 1
244 54.06 humidity 50.0 1440 > th dose independent rect. 3 1
253 54.06 atmosphere 995.0 1440 > th dose independent rect. 3 1
254 54.06 radiation 1.0 1440 < th dose independent rect. 3 1
274 54.06 temperature 10.0 1440 > th dose independent rect. 4 23
288 54.07 temperature 20.0 1440 < th dose dependent rect. 22 1
301 54.12 temperature 20.0 1440 < th dose dependent rect. 7 16
303 54.14 temperature 30.0 30 < th dose dependent rect. 2 1
342 54.22 atmosphere 1000.0 30 > th dose independent rect. 3 23
357 54.29 wind 1.0 30 > th dose independent rect. 2 1
359 54.29 wind 1.0 10 < th dose independent rect. 13 14
387 54.31 temperature 20.0 720 < th dose dependent rect. 24 1
404 54.41 wind 1.0 270 < th dose independent rect. 7 2
407 54.43 temperature 20.0 1440 < th dose dependent sin 20 NA
413 54.46 wind 1.0 30 < th dose dependent rect. 13 14
417 54.47 wind 9.0 43200 > th dose dependent rect. 4 3
427 54.48 radiation 10.0 1440 < th dose dependent rect. 21 1
448 54.50 humidity 80.0 30 > th dose independent rect. 20 1
449 54.50 wind 9.0 43200 > th dose independent rect. 4 3
462 54.51 temperature 20.0 720 < th dose independent rect. 7 1
463 54.51 wind 1.0 270 < th dose independent rect. 7 7
465 54.51 atmosphere 1000.0 30 > th dose dependent rect. 20 1
467 54.51 wind 1.0 30 < th dose dependent rect. 10 17
468 54.52 temperature 10.0 1440 > th dose independent rect. 21 1
471 54.52 temperature 30.0 1440 < th dose independent rect. 21 1
475 54.52 humidity 50.0 1440 > th dose independent rect. 21 1
481 54.52 atmosphere 1005.0 30 > th dose independent rect. 20 1
482 54.52 atmosphere 995.0 1440 > th dose independent rect. 21 1
483 54.52 radiation 1.0 1440 < th dose independent rect. 21 1
505 54.52 temperature 10.0 1440 > th dose independent rect. 22 23
508 54.52 humidity 70.0 30 > th dose dependent rect. 20 1
522 54.55 wind 7.0 30 < th dose independent rect. 20 1
526 54.55 wind 9.0 30 < th dose independent rect. 3 23
529 54.56 temperature 20.0 30 > th dose independent rect. 20 1
531 54.56 temperature 10.0 30 > th dose dependent rect. 20 1
533 54.57 wind 1.0 30 > th dose independent rect. 20 1
535 54.57 temperature 10.0 30 > th dose independent rect. 20 1
537 54.57 temperature 30.0 30 < th dose independent rect. 20 1
538 54.57 humidity 50.0 30 > th dose independent rect. 20 1
542 54.57 atmosphere 1010.0 30 < th dose independent rect. 20 1
544 54.57 radiation 1.0 30 < th dose independent rect. 20 1
549 54.57 precipitation 0.1 30 < th dose independent rect. 20 1
551 54.57 temperature 10.0 30 > th dose independent rect. 21 23
553 54.57 wind 9.0 30 < th dose dependent rect. 20 1
555 54.57 radiation 1.0 30 < th dose dependent rect. 20 1
560 54.57 precipitation 0.1 30 < th dose dependent rect. 20 1
562 54.58 wind 9.0 43200 < th dose independent rect. 4 4
572 54.62 precipitation 0.1 30 < th dose independent rect. 3 23
574 54.62 precipitation 0.1 30 < th dose dependent rect. 3 23
577 54.63 wind 1.0 30 > th dose dependent rect. 20 1
580 54.64 humidity 90.0 30 < th dose independent rect. 20 1
610 54.72 temperature 20.0 720 < th dose dependent rect. 24 3
614 54.73 wind 1.0 30 < th dose independent rect. 7 20
617 54.74 wind 3.0 10 < th dose dependent rect. 12 1
619 54.74 atmosphere 1015.0 30 < th dose dependent rect. 20 1
637 54.77 wind 9.0 43200 < th dose independent rect. 24 8
641 54.78 wind 3.0 10 < th dose dependent rect. 11 3
645 54.79 temperature 30.0 30 < th dose dependent rect. 20 1
654 54.82 wind 9.0 4320 < th dose independent rect. 24 5
673 54.84 temperature 20.0 720 < th dose dependent rect. 24 9
674 54.84 temperature 20.0 720 < th dose dependent rect. 24 14
691 54.86 wind 1.0 270 < th dose independent rect. 7 11
692 54.86 humidity 90.0 30 < th dose dependent rect. 20 1
696 54.87 wind 9.0 4320 < th dose independent rect. 5 5
714 54.91 wind 3.0 4320 > th dose dependent rect. 3 1
739 54.94 temperature 20.0 720 < th dose dependent sin 1 NA
746 54.95 wind 5.0 4320 < th dose independent rect. 3 2
793 54.98 wind 5.0 4320 > th dose independent rect. 3 1
823 55.00 temperature 20.0 720 > th dose independent rect. 7 2
849 55.01 temperature 20.0 720 < th dose dependent rect. 6 22
852 55.02 wind 9.0 30 < th dose independent rect. 21 23
854 55.02 wind 1.0 14400 < th dose dependent rect. 14 5
888 55.04 radiation 40.0 14400 < th dose dependent rect. 21 1
909 55.05 wind 9.0 4320 < th dose independent rect. 23 11
918 55.06 wind 9.0 1440 < th dose independent rect. 21 1
940 55.07 wind 5.0 4320 > th dose dependent rect. 3 5
957 55.08 wind 9.0 4320 < th dose independent rect. 24 9
959 55.08 temperature 20.0 720 < th dose dependent no NA NA
978 55.08 temperature 20.0 720 < th dose dependent rect. 12 21
983 55.08 temperature 20.0 720 < th dose dependent rect. 17 22
989 55.08 temperature 20.0 720 < th dose dependent rect. 15 23
996 55.09 wind 1.0 720 > th dose independent rect. 7 2