Os09g0348200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0348200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 249.22 | 0.742 | 3.04 | -0.252 | 0.112 | 11.2 | -0.258 | -36.2 | 0.133 | 9.45 | 0.1586 | 245 | -- | -- |
| 263.88 | 0.762 | 2.94 | 0.128 | 0.108 | -0.424 | -0.532 | -- | 0.0914 | 9.96 | 0.1586 | 245 | -- | -- |
| 249.21 | 0.735 | 3.03 | -0.262 | 0.139 | 11.2 | -- | -36.1 | 0.133 | 8.01 | 0.2375 | 245 | -- | -- |
| 254.78 | 0.743 | 2.96 | -0.0858 | 0.17 | 1.7 | -- | -- | 0.111 | 9.36 | 1.38 | 199 | -- | -- |
| 250.08 | 0.737 | 3.06 | -0.3 | -- | 12.2 | -- | -40.4 | 0.13 | -- | 0.2636 | 245 | -- | -- |
| 264.08 | 0.762 | 2.93 | 0.122 | 0.109 | -- | -0.523 | -- | 0.0925 | 9.94 | -- | -- | -- | -- |
| 265.04 | 0.762 | 2.94 | 0.0999 | 0.123 | -- | -- | -- | 0.0903 | 8.57 | -- | -- | -- | -- |
| 254.77 | 0.743 | 2.94 | 0.05 | -- | 2.16 | -- | -- | 0.103 | -- | 1.581 | 224 | -- | -- |
| 253.01 | 0.741 | 2.93 | -- | 0.182 | 2.26 | -- | -- | 0.0979 | 8.22 | 1.711 | 275 | -- | -- |
| 265.89 | 0.762 | 2.94 | 0.1 | -- | -- | -- | -- | 0.0914 | -- | -- | -- | -- | -- |
| 265.3 | 0.762 | 2.94 | -- | 0.123 | -- | -- | -- | 0.0792 | 8.51 | -- | -- | -- | -- |
| 254.83 | 0.743 | 2.94 | -- | -- | 2.17 | -- | -- | 0.098 | -- | 1.607 | 219 | -- | -- |
| 266.15 | 0.761 | 2.94 | -- | -- | -- | -- | -- | 0.0803 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 239.59 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 5 | 239.59 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 9 | 239.94 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 10 | 240.13 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 12 | 240.33 | wind | 7.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 29 | 240.87 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 36 | 242.41 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 37 | 242.41 | wind | 9.0 | 90 | > th | dose dependent | rect. | 19 | 15 |
| 54 | 244.12 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 55 | 244.14 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 14 |
| 70 | 244.84 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 7 | 12 |
| 72 | 244.91 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 13 |
| 100 | 245.91 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 23 | NA |
| 114 | 246.13 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 121 | 246.35 | precipitation | 0.1 | 270 | < th | dose independent | sin | 22 | NA |
| 122 | 246.35 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 22 | NA |
| 124 | 246.39 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 9 | 10 |
| 125 | 246.46 | precipitation | 0.1 | 270 | > th | dose independent | sin | 22 | NA |
| 133 | 246.56 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 22 |
| 138 | 246.62 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 9 | 11 |
| 221 | 248.03 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 7 | 1 |
| 223 | 248.03 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 7 | 1 |
| 309 | 249.42 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 317 | 249.59 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 21 |
| 327 | 249.72 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 15 | 20 |
| 360 | 250.03 | wind | 7.0 | 10 | > th | dose independent | sin | 5 | NA |
| 371 | 250.15 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 389 | 250.28 | precipitation | 0.1 | 270 | > th | dose dependent | no | NA | NA |
| 400 | 250.31 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 405 | 250.41 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 10 | 13 |
| 412 | 250.46 | wind | 7.0 | 10 | < th | dose independent | sin | 5 | NA |
| 445 | 250.75 | wind | 3.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 450 | 250.78 | wind | 3.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 454 | 250.81 | radiation | 1.0 | 270 | < th | dose independent | rect. | 6 | 6 |
| 460 | 250.88 | wind | 3.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 471 | 250.99 | wind | 5.0 | 90 | > th | dose independent | sin | 4 | NA |
| 479 | 251.03 | humidity | 90.0 | 270 | < th | dose independent | rect. | 5 | 14 |
| 480 | 251.03 | wind | 3.0 | 10 | > th | dose dependent | rect. | 9 | 5 |
| 484 | 251.07 | wind | 7.0 | 10 | > th | dose independent | rect. | 9 | 5 |
| 547 | 251.38 | wind | 5.0 | 90 | < th | dose independent | sin | 4 | NA |
| 549 | 251.40 | wind | 7.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 567 | 251.47 | wind | 9.0 | 90 | < th | dose dependent | sin | 4 | NA |
| 642 | 251.81 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 11 |
| 669 | 251.94 | wind | 9.0 | 10 | < th | dose dependent | sin | 3 | NA |
| 709 | 252.14 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 15 | 4 |
| 735 | 252.22 | wind | 3.0 | 90 | > th | dose dependent | rect. | 22 | 17 |
| 747 | 252.26 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 15 | 4 |
| 748 | 252.26 | humidity | 90.0 | 270 | > th | dose independent | rect. | 6 | 6 |
| 763 | 252.28 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 790 | 252.36 | wind | 5.0 | 90 | < th | dose independent | rect. | 1 | 13 |
| 827 | 252.48 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 15 | 20 |
| 835 | 252.50 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 19 |
| 838 | 252.51 | wind | 7.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 878 | 252.56 | wind | 3.0 | 10 | > th | dose dependent | rect. | 23 | 15 |
| 928 | 252.64 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 11 | 12 |
| 947 | 252.68 | humidity | 90.0 | 270 | > th | dose independent | rect. | 6 | 12 |
| 989 | 252.75 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 22 | 22 |