Os09g0347900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0347900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 75.49 | 0.408 | 8.64 | -2.78 | 0.305 | 0.707 | -0.246 | -0.464 | -0.443 | 11.9 | 22.1 | 1381 | -- | -- |
| 76.06 | 0.406 | 8.62 | -2.67 | 0.303 | 0.703 | -0.266 | -- | -0.401 | 11.7 | 22 | 1364 | -- | -- |
| 75.74 | 0.405 | 8.64 | -2.77 | 0.308 | 0.696 | -- | -0.436 | -0.445 | 12 | 22.1 | 1380 | -- | -- |
| 76.17 | 0.406 | 8.62 | -2.64 | 0.31 | 0.714 | -- | -- | -0.41 | 12.1 | 22.02 | 1355 | -- | -- |
| 81.1 | 0.419 | 8.64 | -2.79 | -- | 0.709 | -- | -0.434 | -0.452 | -- | 22.2 | 1517 | -- | -- |
| 94.12 | 0.455 | 8.57 | -2.37 | 0.272 | -- | -0.207 | -- | -0.178 | 11.6 | -- | -- | -- | -- |
| 94.29 | 0.455 | 8.57 | -2.38 | 0.273 | -- | -- | -- | -0.178 | 11.7 | -- | -- | -- | -- |
| 81.55 | 0.421 | 8.63 | -2.66 | -- | 0.706 | -- | -- | -0.411 | -- | 22.1 | 1514 | -- | -- |
| 147.21 | 0.565 | 8.4 | -- | 0.24 | -1.47 | -- | -- | 0.613 | 13.9 | 22 | 47520 | -- | -- |
| 98.99 | 0.465 | 8.58 | -2.39 | -- | -- | -- | -- | -0.182 | -- | -- | -- | -- | -- |
| 243.7 | 0.73 | 8.51 | -- | 0.304 | -- | -- | -- | 0.0868 | 12.2 | -- | -- | -- | -- |
| 149.96 | 0.57 | 8.4 | -- | -- | -1.46 | -- | -- | 0.593 | -- | 22.05 | 47520 | -- | -- |
| 249.52 | 0.737 | 8.52 | -- | -- | -- | -- | -- | 0.0833 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 2 | 75.76 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 3 | 75.77 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 4 | 75.94 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 7 | 76.05 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 1 | 2 |
| 8 | 76.06 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 10 | 76.08 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 46 | 76.57 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 55 | 76.65 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 78 | 76.75 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 99 | 76.85 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 4 | 1 |
| 100 | 76.85 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 170 | 77.17 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 234 | 77.44 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 242 | 77.47 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 244 | 77.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 246 | 77.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 251 | 77.50 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 279 | 77.57 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 297 | 77.59 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 307 | 77.62 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 330 | 77.66 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 336 | 77.66 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 23 | 18 |
| 378 | 77.73 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 14 |
| 399 | 77.75 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 5 |
| 411 | 77.77 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 455 | 77.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 456 | 77.82 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 7 | NA |
| 461 | 77.82 | temperature | 30.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 491 | 77.84 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 519 | 77.87 | temperature | 15.0 | 1440 | > th | dose dependent | sin | 13 | NA |
| 532 | 77.89 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 557 | 77.91 | temperature | 20.0 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 592 | 77.95 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 595 | 77.95 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 20 | 2 |
| 602 | 77.96 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 9 |
| 647 | 77.99 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 675 | 78.01 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 17 |
| 732 | 78.06 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 764 | 78.08 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 829 | 78.13 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 871 | 78.17 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 7 |
| 941 | 78.21 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 985 | 78.24 | temperature | 25.0 | 1440 | < th | dose dependent | no | NA | NA |