FiT-DB / Search/ Help/ Sample detail

Os09g0346700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF810 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11 (0.0147) R2 : 0.535
β1 : 1.17 (0.0538) R2dD : 0.506 R2D : 0.374
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.339 (0.0313) R2dN8 : 0.16 R2N8 : 0.0288
σ : 0.276
deviance : 34.77
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.61 0.26 11 1.13 0.281 0.424 0.541 0.43 0.401 18.4 90.77 264 -- --
30.82 0.259 11 1.14 0.267 0.431 0.366 -- 0.404 18.5 91.2 254 -- --
31.12 0.26 11 1.14 0.265 0.413 -- 0.113 0.401 18.5 91.22 254 -- --
31.14 0.26 11 1.14 0.259 0.416 -- -- 0.401 18.5 91.31 248 -- --
32.4 0.265 11 1.17 -- 0.319 -- -0.362 0.433 -- 91 1667 -- --
33.75 0.272 11 1.18 0.126 -- 0.201 -- 0.341 20.6 -- -- -- --
33.88 0.273 11 1.18 0.126 -- -- -- 0.341 20.5 -- -- -- --
32.59 0.266 11 1.12 -- 0.313 -- -- 0.416 -- 90.14 1665 -- --
62.21 0.367 11 -- 0.203 0.661 -- -- 0.373 19.6 89.14 1826 -- --
34.77 0.276 11 1.17 -- -- -- -- 0.339 -- -- -- -- --
70.31 0.392 11 -- 0.123 -- -- -- 0.21 21.2 -- -- -- --
64.11 0.373 11 -- -- 0.571 -- -- 0.347 -- 88.86 1694 -- --
71.19 0.394 11 -- -- -- -- -- 0.209 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.19 temperature 20.0 270 > th dose independent rect. 13 17
4 27.53 temperature 20.0 90 > th dose independent rect. 15 16
7 27.60 temperature 10.0 90 > th dose dependent rect. 15 16
9 27.69 temperature 20.0 10 > th dose independent rect. 15 18
28 28.01 temperature 10.0 270 > th dose dependent rect. 13 17
47 28.25 temperature 10.0 270 > th dose dependent rect. 6 7
71 28.46 humidity 70.0 270 > th dose dependent rect. 22 9
73 28.48 radiation 1.0 90 < th dose dependent sin 14 NA
83 28.59 temperature 15.0 270 > th dose independent rect. 17 9
84 28.60 radiation 1.0 90 > th dose independent rect. 15 15
86 28.62 humidity 50.0 270 > th dose independent rect. 16 22
89 28.63 radiation 10.0 270 < th dose independent rect. 16 10
91 28.63 humidity 50.0 270 > th dose independent rect. 17 20
92 28.63 humidity 50.0 90 > th dose independent rect. 19 20
96 28.65 radiation 20.0 270 < th dose dependent rect. 16 10
97 28.66 wind 1.0 30 > th dose independent rect. 19 20
105 28.70 temperature 30.0 10 < th dose dependent rect. 19 9
108 28.72 humidity 50.0 270 > th dose independent rect. 17 9
116 28.74 humidity 90.0 270 < th dose independent rect. 1 12
120 28.75 radiation 1.0 90 < th dose independent sin 14 NA
121 28.75 humidity 90.0 30 < th dose independent rect. 15 4
132 28.77 radiation 1.0 90 > th dose independent sin 14 NA
150 28.82 temperature 10.0 270 > th dose independent rect. 2 15
151 28.82 atmosphere 1015.0 270 < th dose independent rect. 2 15
153 28.82 temperature 10.0 90 > th dose dependent rect. 15 4
154 28.83 humidity 80.0 270 > th dose independent rect. 22 9
156 28.83 temperature 15.0 90 > th dose independent rect. 19 20
165 28.85 wind 9.0 270 < th dose independent rect. 17 9
171 28.86 precipitation 0.1 90 < th dose independent rect. 15 4
174 28.86 precipitation 0.1 90 < th dose dependent rect. 15 4
175 28.87 temperature 15.0 270 > th dose independent rect. 17 20
180 28.90 temperature 15.0 30 > th dose independent rect. 19 9
186 28.93 humidity 50.0 270 > th dose independent rect. 6 7
187 28.93 wind 9.0 90 < th dose independent rect. 19 20
193 28.95 temperature 20.0 90 > th dose independent rect. 15 4
194 28.95 radiation 1.0 270 > th dose independent rect. 13 4
195 28.95 precipitation 0.1 270 < th dose independent rect. 2 15
199 28.95 precipitation 0.1 270 < th dose dependent rect. 2 15
206 28.97 precipitation 0.1 90 < th dose independent rect. 19 20
207 28.97 temperature 10.0 10 > th dose dependent rect. 9 6
209 28.97 precipitation 0.1 90 < th dose dependent rect. 19 20
213 28.98 wind 9.0 270 < th dose independent rect. 16 23
234 29.02 wind 9.0 270 < th dose independent rect. 17 20
236 29.02 atmosphere 995.0 90 > th dose independent rect. 19 20
241 29.03 precipitation 0.1 270 < th dose independent rect. 17 9
247 29.03 precipitation 0.1 270 < th dose dependent rect. 17 9
250 29.04 radiation 1.0 270 > th dose independent rect. 15 1
251 29.04 wind 1.0 30 > th dose independent rect. 15 4
252 29.04 temperature 10.0 90 > th dose independent rect. 15 4
254 29.04 temperature 10.0 1440 > th dose independent rect. 16 4
257 29.04 atmosphere 1010.0 90 < th dose independent rect. 15 4
261 29.04 atmosphere 995.0 270 > th dose independent rect. 2 15
263 29.04 temperature 10.0 1440 > th dose independent rect. 20 20
268 29.05 precipitation 0.1 30 < th dose independent rect. 4 15
272 29.05 precipitation 0.1 30 < th dose dependent rect. 4 15
290 29.07 temperature 10.0 270 > th dose dependent rect. 22 9
293 29.08 wind 7.0 270 < th dose independent rect. 6 7
294 29.08 precipitation 0.1 30 < th dose independent rect. 19 9
295 29.08 precipitation 0.1 30 < th dose dependent rect. 19 9
301 29.09 temperature 10.0 270 > th dose dependent rect. 15 1
305 29.10 radiation 40.0 90 < th dose independent rect. 13 6
311 29.11 temperature 10.0 270 > th dose independent rect. 13 4
313 29.11 atmosphere 1010.0 270 < th dose independent rect. 13 4
315 29.11 radiation 40.0 90 < th dose independent rect. 15 4
316 29.11 wind 9.0 270 < th dose independent rect. 2 15
325 29.12 precipitation 0.1 270 < th dose independent rect. 13 4
326 29.12 humidity 50.0 10 > th dose independent rect. 9 6
328 29.12 wind 1.0 270 > th dose independent rect. 17 9
330 29.12 temperature 30.0 30 < th dose independent rect. 19 9
331 29.12 humidity 50.0 30 > th dose independent rect. 19 9
333 29.12 atmosphere 995.0 30 > th dose independent rect. 19 9
334 29.12 radiation 1.0 30 < th dose independent rect. 19 9
341 29.12 temperature 10.0 30 > th dose independent rect. 4 15
343 29.12 atmosphere 1015.0 30 < th dose independent rect. 4 15
346 29.12 precipitation 0.1 270 < th dose dependent rect. 13 4
348 29.12 radiation 10.0 30 < th dose dependent rect. 19 9
352 29.13 wind 9.0 30 < th dose independent rect. 15 4
361 29.14 radiation 1.0 90 > th dose independent rect. 15 4
386 29.15 precipitation 0.1 270 < th dose independent rect. 17 20
390 29.15 precipitation 0.1 270 < th dose dependent rect. 17 20
391 29.16 wind 9.0 30 < th dose independent rect. 19 9
398 29.16 temperature 10.0 270 > th dose dependent rect. 13 4
416 29.19 temperature 10.0 270 > th dose independent rect. 15 1
418 29.19 atmosphere 1010.0 270 < th dose independent rect. 15 1
420 29.19 atmosphere 995.0 270 > th dose independent rect. 13 4
423 29.19 temperature 10.0 270 > th dose independent rect. 16 23
424 29.20 precipitation 0.1 270 < th dose independent rect. 15 1
425 29.20 wind 9.0 270 < th dose independent rect. 13 4
427 29.20 precipitation 0.1 270 < th dose dependent rect. 15 1
433 29.21 humidity 80.0 90 < th dose independent rect. 19 20
461 29.24 humidity 90.0 270 > th dose independent rect. 1 7
462 29.24 precipitation 0.1 90 < th dose independent rect. 7 8
481 29.24 precipitation 0.1 90 < th dose dependent rect. 7 8
490 29.24 radiation 1.0 90 < th dose dependent rect. 9 19
494 29.25 radiation 1.0 270 > th dose dependent rect. 15 1
497 29.26 atmosphere 995.0 90 > th dose independent rect. 15 4
498 29.26 radiation 1.0 270 > th dose independent rect. 6 7
501 29.26 atmosphere 995.0 270 > th dose independent rect. 17 9
513 29.27 wind 9.0 270 < th dose independent rect. 15 1
516 29.27 atmosphere 1015.0 90 < th dose independent rect. 15 16
529 29.28 wind 1.0 270 > th dose independent rect. 15 1
578 29.30 atmosphere 995.0 90 > th dose independent rect. 7 8
590 29.30 humidity 80.0 270 > th dose dependent rect. 1 6
609 29.32 wind 1.0 270 > th dose independent rect. 13 4
611 29.32 temperature 10.0 270 > th dose independent rect. 6 7
613 29.32 atmosphere 1015.0 270 < th dose independent rect. 6 7
620 29.32 wind 9.0 30 < th dose independent rect. 4 15
621 29.32 temperature 10.0 90 > th dose independent rect. 15 16
622 29.32 temperature 10.0 270 > th dose independent rect. 13 17
633 29.33 temperature 20.0 270 > th dose independent rect. 22 9
644 29.34 wind 1.0 10 > th dose independent rect. 9 6
656 29.34 atmosphere 1015.0 270 < th dose independent rect. 13 17
671 29.35 humidity 80.0 270 > th dose dependent sin 8 NA
684 29.36 precipitation 0.1 90 < th dose independent rect. 15 16
692 29.36 precipitation 0.1 90 < th dose dependent rect. 15 16
693 29.36 radiation 1.0 90 < th dose dependent rect. 5 23
701 29.37 humidity 90.0 90 < th dose dependent rect. 15 4
712 29.38 radiation 40.0 90 < th dose independent rect. 15 16
720 29.39 radiation 40.0 270 < th dose independent rect. 15 1
722 29.39 wind 1.0 90 > th dose independent rect. 7 8
725 29.39 wind 9.0 270 < th dose independent rect. 13 17
726 29.39 atmosphere 995.0 270 > th dose independent rect. 13 17
736 29.40 atmosphere 995.0 270 > th dose independent rect. 15 1
742 29.40 humidity 50.0 270 > th dose independent rect. 7 15
743 29.40 atmosphere 995.0 270 > th dose independent rect. 17 20
754 29.41 atmosphere 1015.0 10 < th dose independent rect. 15 18
760 29.42 precipitation 0.1 270 < th dose independent rect. 13 17
767 29.42 precipitation 0.1 270 < th dose dependent rect. 13 17
772 29.43 wind 9.0 90 < th dose independent rect. 15 16
818 29.46 radiation 1.0 270 < th dose independent rect. 11 15
822 29.46 humidity 80.0 10 < th dose independent rect. 20 19
825 29.46 precipitation 0.1 270 < th dose independent rect. 16 22
830 29.46 precipitation 0.1 270 < th dose dependent rect. 16 22
846 29.48 humidity 90.0 270 < th dose independent rect. 15 1
854 29.48 atmosphere 995.0 30 > th dose dependent rect. 15 4
860 29.49 humidity 60.0 270 > th dose independent rect. 6 20
888 29.52 wind 9.0 10 < th dose independent rect. 9 6
926 29.54 atmosphere 995.0 30 > th dose independent rect. 4 15
931 29.54 humidity 90.0 270 < th dose dependent rect. 15 1