Os09g0339800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycerophosphoryl diester phosphodiesterase family protein.
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Os09g0339800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycerophosphoryl diester phosphodiesterase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 153.04 | 0.581 | -6120 | 37400 | 0.168 | -1160000 | 0.44 | 7120000 | -0.0869 | 5.36 | 1 | 4 | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 164.18 | 0.601 | 3.11 | -0.0208 | 0.138 | -- | -0.0136 | -- | -0.107 | 7.24 | -- | -- | -- | -- |
| 164.18 | 0.6 | 3.11 | -0.0211 | 0.138 | -- | -- | -- | -0.107 | 7.2 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 165.18 | 0.601 | 3.11 | -0.0186 | -- | -- | -- | -- | -0.104 | -- | -- | -- | -- | -- |
| 164.19 | 0.599 | 3.11 | -- | 0.137 | -- | -- | -- | -0.104 | 7.21 | -- | -- | -- | -- |
| -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- | -- |
| 165.19 | 0.6 | 3.11 | -- | -- | -- | -- | -- | -0.102 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 136.02 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 18 | 2 |
| 2 | 136.02 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 18 | 2 |
| 30 | 140.27 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 1 |
| 62 | 147.25 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 64 | 147.75 | atmosphere | 995 | 270 | > th | dose independent | sin | 9 | NA |
| 71 | 148.74 | atmosphere | 995 | 270 | < th | dose independent | sin | 9 | NA |
| 155 | 149.65 | atmosphere | 995 | 270 | < th | dose dependent | sin | 9 | NA |
| 277 | 150.62 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 18 |
| 285 | 150.87 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 303 | 150.97 | radiation | 10 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 319 | 151.08 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 1 |
| 321 | 151.08 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 1 |
| 355 | 151.46 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 1 |
| 382 | 151.83 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 12 | 9 |
| 384 | 151.86 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 10 | 10 |
| 408 | 152.01 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 2 |
| 514 | 153.04 | atmosphere | 995 | 270 | < th | dose dependent | no | NA | NA |
| 754 | 153.71 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 9 | 4 |
| 759 | 153.77 | atmosphere | 995 | 270 | < th | dose independent | no | NA | NA |
| 977 | 153.85 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 11 | 2 |
| 981 | 153.86 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 8 | 6 |
| 994 | 154.05 | atmosphere | 1000 | 720 | < th | dose independent | rect. | 9 | 4 |