Os09g0338500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Desaturase/cytochrome b5 protein.
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Os09g0338500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Desaturase/cytochrome b5 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 360.06 | 0.892 | 10.2 | -0.372 | 2.49 | -2.56 | -2.39 | -0.996 | -0.402 | 14.2 | 59.78 | 692 | 18.2 | 1.24 |
| 359.38 | 0.883 | 10.2 | -0.443 | 2.47 | -2.62 | -1.57 | -- | -0.424 | 14.3 | 59.84 | 673 | 18.4 | 1.43 |
| 360.05 | 0.884 | 10.2 | -0.702 | 2.1 | -2.83 | -- | 1.42 | -0.536 | 14.1 | 58.21 | 637 | 18.5 | 2.03 |
| 361.37 | 0.885 | 10.2 | -0.525 | 1.89 | -3.13 | -- | -- | -0.515 | 14.3 | 58.48 | 630 | 18.7 | 1.87 |
| 375.53 | 0.903 | 10.1 | -0.532 | -- | -4.59 | -- | 1.5 | -0.365 | -- | 45.1 | 654 | 18.1 | 3.36 |
| 476.04 | 1.02 | 10.1 | -0.539 | 4.05 | -- | -1.26 | -- | -0.42 | 13.5 | -- | -- | -- | -- |
| 482.42 | 1.03 | 10.1 | -0.581 | 4.05 | -- | -- | -- | -0.427 | 13.5 | -- | -- | -- | -- |
| 382.89 | 0.911 | 10.2 | -0.487 | -- | -4.54 | -- | -- | -0.403 | -- | 43.41 | 652 | 18.1 | 3.32 |
| 366.12 | 0.891 | 10.2 | -- | 1.8 | -3.19 | -- | -- | -0.458 | 14.4 | 57.32 | 628 | 18.7 | 1.83 |
| 1489.04 | 1.8 | 10.2 | -0.744 | -- | -- | -- | -- | -0.515 | -- | -- | -- | -- | -- |
| 491.33 | 1.04 | 10.1 | -- | 4.06 | -- | -- | -- | -0.362 | 13.5 | -- | -- | -- | -- |
| 388.32 | 0.918 | 10.1 | -- | -- | -4.49 | -- | -- | -0.289 | -- | 37.61 | 672 | 17.7 | 3.75 |
| 1503.62 | 1.81 | 10.2 | -- | -- | -- | -- | -- | -0.432 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 369.45 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 10 | 375.91 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 25 | 379.93 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 33 | 382.16 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 12 |
| 44 | 385.66 | radiation | 1.0 | 720 | < th | dose independent | rect. | 13 | 6 |
| 46 | 386.20 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 87 | 392.47 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 14 |
| 99 | 393.42 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 15 | 12 |
| 100 | 393.45 | humidity | 80.0 | 720 | < th | dose independent | rect. | 12 | 9 |
| 106 | 394.26 | radiation | 1.0 | 720 | < th | dose independent | rect. | 14 | 14 |
| 120 | 395.63 | humidity | 80.0 | 720 | > th | dose independent | rect. | 11 | 10 |
| 125 | 395.81 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 11 |
| 142 | 396.85 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 11 | 10 |
| 158 | 398.04 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 12 |
| 174 | 398.96 | humidity | 90.0 | 720 | < th | dose independent | rect. | 12 | 12 |
| 218 | 400.88 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 11 |
| 219 | 400.99 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 17 |
| 225 | 401.21 | humidity | 90.0 | 720 | < th | dose independent | rect. | 20 | 3 |
| 248 | 402.05 | radiation | 1.0 | 720 | > th | dose independent | rect. | 12 | 18 |
| 256 | 402.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 23 |
| 257 | 402.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 260 | 402.49 | humidity | 70.0 | 720 | > th | dose dependent | sin | 18 | NA |
| 292 | 403.54 | radiation | 1.0 | 90 | < th | dose independent | sin | 10 | NA |
| 298 | 403.74 | radiation | 1.0 | 90 | > th | dose independent | sin | 10 | NA |
| 306 | 403.89 | radiation | 10.0 | 30 | < th | dose dependent | sin | 9 | NA |
| 330 | 404.42 | radiation | 1.0 | 720 | > th | dose independent | rect. | 12 | 7 |
| 341 | 404.50 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 14 |
| 342 | 404.50 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 14 |
| 354 | 404.78 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 2 |
| 360 | 404.89 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 13 | 10 |
| 403 | 405.98 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 10 |
| 404 | 405.98 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 10 |
| 454 | 407.03 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 11 | 17 |
| 470 | 407.55 | humidity | 80.0 | 720 | > th | dose independent | sin | 19 | NA |
| 482 | 407.72 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 22 |
| 504 | 408.30 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 22 |
| 520 | 408.55 | humidity | 70.0 | 720 | > th | dose independent | sin | 14 | NA |
| 554 | 408.95 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 19 |
| 570 | 409.22 | humidity | 70.0 | 720 | < th | dose independent | rect. | 13 | 19 |
| 581 | 409.47 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 18 |
| 582 | 409.47 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 18 |
| 583 | 409.47 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 12 | 19 |
| 679 | 410.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 20 |
| 688 | 410.97 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 22 |
| 689 | 410.97 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 22 |
| 727 | 411.55 | radiation | 1.0 | 90 | > th | dose independent | rect. | 18 | 15 |
| 731 | 411.61 | humidity | 90.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 752 | 412.09 | humidity | 90.0 | 30 | < th | dose independent | rect. | 16 | 17 |
| 846 | 413.09 | humidity | 70.0 | 720 | < th | dose independent | sin | 14 | NA |
| 848 | 413.11 | radiation | 1.0 | 720 | < th | dose independent | sin | 22 | NA |
| 850 | 413.13 | humidity | 80.0 | 720 | > th | dose independent | rect. | 10 | 18 |
| 879 | 413.44 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 905 | 413.63 | humidity | 80.0 | 720 | < th | dose independent | sin | 19 | NA |
| 906 | 413.65 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 954 | 414.09 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 15 |
| 957 | 414.13 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 958 | 414.13 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 15 |