Os09g0334800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Concanavalin A-like lectin/glucanase domain containing protein.
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Os09g0334800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Concanavalin A-like lectin/glucanase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.26 | 0.496 | 5.76 | 4.23 | 2.63 | 0.135 | -0.35 | -2.79 | 0.97 | 19.2 | 0.96 | 4295 | -- | -- |
| 123.83 | 0.518 | 5.78 | 4.2 | 2.65 | 0.81 | -0.0559 | -- | 0.976 | 19.2 | 0.5334 | 5798 | -- | -- |
| 111.34 | 0.491 | 5.76 | 4.27 | 2.62 | 0.0545 | -- | -3.05 | 0.966 | 19.1 | 0.6702 | 4352 | -- | -- |
| 118.56 | 0.507 | 5.79 | 3.77 | 2.67 | 0.982 | -- | -- | 0.948 | 18.9 | 0.3263 | 8972 | -- | -- |
| 443.01 | 0.986 | 5.8 | 3.49 | -- | 0.65 | -- | -0.298 | 0.729 | -- | 0.6205 | 4443 | -- | -- |
| 126.34 | 0.527 | 5.86 | 3.5 | 2.62 | -- | -0.279 | -- | 0.769 | 19.2 | -- | -- | -- | -- |
| 126.55 | 0.527 | 5.86 | 3.5 | 2.62 | -- | -- | -- | 0.768 | 19.2 | -- | -- | -- | -- |
| 442.36 | 0.984 | 5.79 | 3.48 | -- | 0.658 | -- | -- | 0.733 | -- | 0.3263 | 8972 | -- | -- |
| 425.58 | 0.961 | 5.94 | -- | 2.47 | 0.873 | -- | -- | 0.354 | 19.2 | 70.1 | 47520 | -- | -- |
| 489.54 | 1.03 | 5.8 | 3.46 | -- | -- | -- | -- | 0.722 | -- | -- | -- | -- | -- |
| 450.11 | 0.992 | 5.94 | -- | 2.59 | -- | -- | -- | 0.378 | 19.3 | -- | -- | -- | -- |
| 762.37 | 1.29 | 5.88 | -- | -- | 0.621 | -- | -- | 0.346 | -- | 0.3263 | 8972 | -- | -- |
| 804.47 | 1.32 | 5.88 | -- | -- | -- | -- | -- | 0.339 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.95 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 3 | 107.00 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 4 | 107.02 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 6 | 107.02 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 29 | 107.18 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 30 | 107.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 150 | 107.37 | atmosphere | 995.0 | 43200 | > th | dose dependent | sin | 23 | NA |
| 167 | 107.38 | atmosphere | 1015.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 398 | 107.51 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 399 | 107.51 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 402 | 107.51 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 15 | 5 |
| 427 | 107.52 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 429 | 107.52 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 431 | 107.52 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 15 | 3 |
| 432 | 107.52 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 459 | 107.53 | atmosphere | 995.0 | 43200 | > th | dose dependent | no | NA | NA |
| 461 | 107.53 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 465 | 107.53 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 490 | 107.53 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 19 | 19 |
| 497 | 107.53 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 15 | 22 |
| 504 | 107.53 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 553 | 107.54 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 17 | 21 |
| 565 | 107.54 | atmosphere | 995.0 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 574 | 107.55 | atmosphere | 1015.0 | 43200 | < th | dose dependent | no | NA | NA |
| 607 | 107.55 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 19 | 19 |
| 688 | 107.56 | atmosphere | 1015.0 | 43200 | < th | dose dependent | rect. | 12 | 23 |
| 924 | 107.67 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 8 | 1 |