Os09g0334600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cytochrome b5 domain containing protein.
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Os09g0334600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cytochrome b5 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 317.07 | 0.837 | 2.92 | -0.0813 | 0.074 | 0.487 | 0.862 | 3.02 | -0.0929 | 16.1 | 0.4999 | 3111 | -- | -- |
| 318.95 | 0.832 | 2.95 | -0.0951 | 0.0559 | 0.8 | 0.881 | -- | -0.0868 | 16.2 | 0.6814 | 6078 | -- | -- |
| 319.08 | 0.832 | 2.92 | -0.0782 | 0.074 | 0.487 | -- | 3.02 | -0.0929 | 15.8 | 0.4999 | 3111 | -- | -- |
| 320.02 | 0.833 | 2.94 | -0.0302 | 0.15 | 0.727 | -- | -- | -0.0679 | 12.6 | 1 | 6041 | -- | -- |
| 319.52 | 0.833 | 2.92 | -0.0757 | -- | 0.487 | -- | 3.02 | -0.0929 | -- | 0.4999 | 3111 | -- | -- |
| 330.62 | 0.852 | 2.96 | 0.143 | 0.0531 | -- | 0.69 | -- | -0.137 | 16.1 | -- | -- | -- | -- |
| 331.16 | 0.852 | 2.96 | 0.152 | 0.126 | -- | -- | -- | -0.134 | 11.6 | -- | -- | -- | -- |
| 321.15 | 0.835 | 2.95 | -0.0781 | -- | 0.772 | -- | -- | -0.0824 | -- | 0.5196 | 6078 | -- | -- |
| 320.02 | 0.833 | 2.94 | -- | 0.144 | 0.755 | -- | -- | -0.0728 | 11.9 | 0.9618 | 6156 | -- | -- |
| 332.15 | 0.852 | 2.96 | 0.149 | -- | -- | -- | -- | -0.135 | -- | -- | -- | -- | -- |
| 331.77 | 0.852 | 2.96 | -- | 0.124 | -- | -- | -- | -0.151 | 11.5 | -- | -- | -- | -- |
| 321.29 | 0.835 | 2.95 | -- | -- | 0.742 | -- | -- | -0.0767 | -- | 0.7412 | 6044 | -- | -- |
| 332.74 | 0.851 | 2.96 | -- | -- | -- | -- | -- | -0.151 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 307.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 5 | 307.58 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 8 | 307.58 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 11 | 308.96 | temperature | 25.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 12 | 309.35 | humidity | 60.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 13 | 309.41 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 14 | 309.48 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 15 | 309.97 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 16 | 310.27 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 19 | 310.44 | humidity | 80.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 21 | 310.67 | radiation | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 22 | 310.74 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 24 | 310.88 | radiation | 40.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 25 | 310.90 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 27 | 311.01 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 28 | 311.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 30 | 311.01 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 33 | 311.01 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 1 |
| 34 | 311.01 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 35 | 311.01 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 36 | 311.10 | radiation | 1.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 41 | 311.34 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 45 | 311.60 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 49 | 312.18 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 55 | 313.47 | wind | 9.0 | 30 | < th | dose independent | rect. | 13 | 23 |
| 57 | 313.50 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 59 | 313.64 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 62 | 314.67 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 66 | 314.95 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 20 | 2 |
| 70 | 315.21 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 71 | 315.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 5 |
| 72 | 315.29 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 5 |
| 74 | 315.29 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 76 | 315.31 | wind | 1.0 | 720 | < th | dose dependent | rect. | 13 | 3 |
| 79 | 315.45 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 5 |
| 88 | 315.78 | wind | 1.0 | 720 | < th | dose independent | rect. | 12 | 4 |
| 104 | 316.17 | humidity | 90.0 | 270 | < th | dose independent | rect. | 2 | 2 |
| 109 | 316.31 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 6 |
| 136 | 316.54 | wind | 3.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 148 | 316.62 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 7 | 17 |
| 164 | 316.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 10 |
| 177 | 316.85 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 17 |
| 184 | 316.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 17 |
| 186 | 316.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 17 |
| 206 | 316.98 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 19 |
| 210 | 317.00 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 17 |
| 214 | 317.03 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 19 |
| 216 | 317.03 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 19 |
| 217 | 317.04 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 20 |
| 262 | 317.18 | wind | 9.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 272 | 317.18 | wind | 9.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 287 | 317.19 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 23 |
| 313 | 317.25 | radiation | 40.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 331 | 317.25 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 398 | 317.42 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 20 |
| 404 | 317.45 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 19 | NA |
| 408 | 317.45 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 19 | NA |
| 414 | 317.46 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 19 | NA |
| 480 | 317.61 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 18 | NA |
| 512 | 317.69 | wind | 1.0 | 720 | > th | dose independent | rect. | 11 | 7 |
| 524 | 317.72 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 595 | 317.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 23 |
| 606 | 317.94 | wind | 3.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 610 | 317.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 12 |
| 614 | 317.96 | wind | 1.0 | 1440 | > th | dose independent | rect. | 12 | 9 |
| 620 | 317.97 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 17 | 23 |
| 650 | 318.07 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 18 | NA |
| 683 | 318.17 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 16 |
| 719 | 318.27 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 15 |
| 742 | 318.33 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 3 |
| 762 | 318.37 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 7 | 6 |
| 766 | 318.38 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 5 |
| 781 | 318.42 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 17 | 20 |
| 786 | 318.42 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 17 | 20 |
| 788 | 318.43 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 7 | 7 |
| 797 | 318.45 | precipitation | 0.1 | 4320 | > th | dose dependent | no | NA | NA |
| 808 | 318.47 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 17 | 20 |
| 811 | 318.48 | radiation | 1.0 | 720 | < th | dose independent | rect. | 8 | 1 |
| 812 | 318.48 | wind | 1.0 | 720 | > th | dose independent | rect. | 13 | 5 |
| 813 | 318.48 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 819 | 318.49 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 23 |
| 830 | 318.52 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 866 | 318.61 | wind | 1.0 | 720 | > th | dose independent | rect. | 9 | 9 |
| 867 | 318.61 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 907 | 318.75 | wind | 3.0 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 923 | 318.79 | radiation | 30.0 | 720 | > th | dose independent | rect. | 12 | 2 |
| 970 | 318.90 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 979 | 318.92 | wind | 1.0 | 720 | < th | dose dependent | rect. | 8 | 8 |