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Os09g0332700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to PDR-type ABC transporter 2 (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0277) R2 : 0.613
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.81 (0.0704) R2dC : 0.563 R2C : 0.537
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.486 (0.0582) R2dN8 : 0.0765 R2N8 : 0.0507
σ : 0.521
deviance : 124.28
__
_____
C
peak time of C : 20.1
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
99.76 0.469 11.6 0.68 1.49 0.731 0.184 0.687 0.594 18.3 8.054 9 -- --
101.06 0.472 11.6 0.683 1.48 0.654 0.563 -- 0.579 18.6 7.833 8 -- --
98.65 0.466 11.6 0.686 1.47 0.732 -- 0.694 0.585 18.3 7.591 8 -- --
101.73 0.473 11.6 0.676 1.46 0.716 -- -- 0.584 18.4 7.591 8 -- --
205.88 0.672 11.6 0.646 -- 0.906 -- 0.606 0.565 -- 6.29 6 -- --
110.08 0.492 11.6 0.697 1.81 -- 0.874 -- 0.56 20.2 -- -- -- --
112.37 0.496 11.6 0.672 1.81 -- -- -- 0.561 20.1 -- -- -- --
208.23 0.675 11.6 0.644 -- 0.902 -- -- 0.567 -- 6.147 6 -- --
113.74 0.499 11.6 -- 1.46 0.711 -- -- 0.507 18.4 8.13 8 -- --
292.47 0.799 11.6 0.657 -- -- -- -- 0.539 -- -- -- -- --
124.28 0.521 11.6 -- 1.81 -- -- -- 0.486 20.1 -- -- -- --
219.16 0.692 11.6 -- -- 0.904 -- -- 0.495 -- 6.147 6 -- --
303.84 0.814 11.6 -- -- -- -- -- 0.466 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 85.50 temperature 10.0 720 > th dose dependent rect. 7 2
19 91.51 temperature 10.0 720 > th dose dependent rect. 23 11
22 92.17 radiation 40.0 720 < th dose independent rect. 7 2
37 93.16 temperature 30.0 720 < th dose dependent rect. 3 4
39 93.21 temperature 25.0 720 > th dose independent rect. 7 2
49 93.62 radiation 10.0 10 < th dose dependent rect. 23 21
76 94.23 atmosphere 1010.0 90 < th dose independent rect. 7 12
80 94.31 atmosphere 1010.0 10 < th dose independent rect. 8 12
86 94.48 atmosphere 1010.0 10 < th dose independent rect. 1 19
92 94.55 wind 5.0 720 < th dose independent rect. 7 2
100 94.79 temperature 25.0 90 > th dose independent rect. 7 12
123 95.16 temperature 10.0 90 > th dose dependent rect. 7 12
127 95.19 humidity 60.0 720 > th dose independent rect. 7 2
136 95.35 radiation 40.0 720 < th dose independent rect. 23 10
139 95.40 radiation 40.0 90 < th dose dependent rect. 7 12
146 95.51 temperature 15.0 720 > th dose independent rect. 19 2
153 95.55 temperature 25.0 720 < th dose dependent rect. 4 7
169 95.69 temperature 10.0 720 > th dose independent rect. 7 2
172 95.69 atmosphere 995.0 720 > th dose independent rect. 7 2
173 95.69 atmosphere 1015.0 720 < th dose independent rect. 7 2
174 95.69 temperature 10.0 720 > th dose independent rect. 9 22
178 95.73 wind 9.0 720 < th dose independent rect. 19 2
183 95.76 temperature 30.0 720 < th dose independent rect. 19 2
184 95.76 humidity 50.0 720 > th dose independent rect. 19 2
185 95.76 atmosphere 995.0 720 > th dose independent rect. 19 2
186 95.76 radiation 1.0 720 < th dose independent rect. 19 2
191 95.76 temperature 10.0 720 > th dose independent rect. 21 22
192 95.76 radiation 1.0 720 < th dose dependent rect. 19 2
206 95.89 precipitation 0.1 720 < th dose independent rect. 7 2
207 95.89 precipitation 0.1 720 < th dose dependent rect. 7 2
229 96.09 radiation 40.0 10 < th dose dependent rect. 23 21
232 96.14 radiation 40.0 10 < th dose independent rect. 8 12
236 96.15 humidity 50.0 10 > th dose dependent rect. 23 21
269 96.38 radiation 20.0 90 < th dose independent rect. 7 12
274 96.42 wind 9.0 720 < th dose dependent rect. 7 2
275 96.43 wind 1.0 720 > th dose independent rect. 19 2
276 96.43 radiation 40.0 90 < th dose independent rect. 7 12
300 96.59 temperature 25.0 10 > th dose independent rect. 20 11
304 96.60 radiation 1.0 90 < th dose independent rect. 23 20
307 96.62 atmosphere 1015.0 720 < th dose independent rect. 19 2
321 96.71 wind 9.0 90 < th dose independent rect. 7 12
324 96.74 radiation 40.0 10 < th dose dependent rect. 8 12
328 96.77 humidity 50.0 90 > th dose dependent rect. 23 20
341 96.85 temperature 25.0 720 < th dose dependent sin 4 NA
350 96.92 temperature 15.0 90 > th dose independent rect. 19 12
359 96.99 radiation 1.0 720 < th dose dependent rect. 19 11
390 97.17 radiation 40.0 720 < th dose independent rect. 16 17
391 97.17 temperature 10.0 30 > th dose dependent rect. 20 11
397 97.22 temperature 15.0 270 > th dose independent rect. 9 13
401 97.24 wind 9.0 90 < th dose independent rect. 19 12
404 97.27 temperature 10.0 90 > th dose independent rect. 7 12
406 97.27 temperature 30.0 90 < th dose independent rect. 19 12
407 97.27 humidity 50.0 90 > th dose independent rect. 19 12
409 97.27 atmosphere 995.0 90 > th dose independent rect. 19 12
411 97.27 radiation 40.0 90 < th dose independent rect. 19 12
412 97.28 temperature 25.0 720 < th dose independent rect. 2 10
415 97.29 temperature 10.0 720 > th dose dependent sin 6 NA
420 97.31 radiation 1.0 30 > th dose independent rect. 5 9
435 97.32 temperature 10.0 270 > th dose dependent rect. 23 19
437 97.33 wind 1.0 720 > th dose independent rect. 7 2
442 97.36 humidity 60.0 270 > th dose independent rect. 22 11
452 97.43 wind 9.0 270 < th dose independent rect. 22 11
453 97.43 temperature 10.0 270 > th dose independent rect. 22 11
456 97.43 atmosphere 995.0 270 > th dose independent rect. 22 11
463 97.50 atmosphere 995.0 90 > th dose independent rect. 7 12
465 97.51 humidity 50.0 10 > th dose dependent rect. 8 12
468 97.53 humidity 50.0 720 > th dose independent rect. 17 14
507 97.76 humidity 60.0 720 > th dose independent rect. 21 14
531 97.86 radiation 40.0 10 < th dose independent rect. 23 21
542 97.89 humidity 50.0 90 > th dose dependent rect. 7 12
550 97.92 temperature 10.0 720 > th dose dependent rect. 22 6
551 97.92 radiation 40.0 10 < th dose dependent rect. 7 23
557 97.94 precipitation 0.1 90 < th dose independent rect. 19 12
559 97.94 precipitation 0.1 90 < th dose dependent rect. 19 12
565 97.98 atmosphere 1015.0 270 < th dose independent rect. 9 13
593 98.11 radiation 1.0 30 > th dose independent sin 1 NA
597 98.12 humidity 60.0 90 > th dose independent rect. 1 18
600 98.12 radiation 20.0 10 < th dose dependent rect. 7 23
605 98.15 atmosphere 1010.0 10 < th dose independent rect. 1 10
650 98.27 wind 9.0 270 < th dose independent rect. 9 13
664 98.30 precipitation 0.1 270 < th dose independent rect. 22 11
665 98.30 precipitation 0.1 90 < th dose independent rect. 7 12
671 98.30 precipitation 0.1 270 < th dose dependent rect. 22 11
672 98.30 precipitation 0.1 90 < th dose dependent rect. 7 12
683 98.31 radiation 40.0 10 < th dose independent rect. 1 19
705 98.40 temperature 30.0 720 < th dose independent rect. 7 2
706 98.40 temperature 30.0 270 < th dose independent rect. 22 11
708 98.40 radiation 20.0 90 < th dose independent rect. 23 20
725 98.44 humidity 50.0 90 > th dose dependent rect. 1 18
733 98.47 temperature 15.0 10 > th dose independent rect. 20 18
734 98.48 temperature 20.0 720 < th dose independent rect. 5 2
742 98.50 precipitation 0.1 270 < th dose independent rect. 3 11
745 98.50 precipitation 0.1 270 < th dose dependent rect. 3 11
748 98.52 radiation 30.0 90 < th dose dependent rect. 11 8
777 98.62 atmosphere 995.0 10 > th dose independent rect. 14 6
778 98.62 atmosphere 1010.0 90 < th dose independent rect. 19 6
783 98.63 wind 9.0 720 < th dose independent rect. 21 22
833 98.77 wind 1.0 90 > th dose independent rect. 7 12
837 98.79 radiation 1.0 720 > th dose independent rect. 7 2
844 98.81 precipitation 0.1 720 < th dose independent rect. 1 6
858 98.81 precipitation 0.1 720 < th dose dependent rect. 1 6
881 98.87 radiation 1.0 720 > th dose independent rect. 9 7
883 98.87 atmosphere 995.0 10 > th dose dependent rect. 14 6
890 98.89 temperature 20.0 720 > th dose independent sin 6 NA
904 98.92 precipitation 0.1 720 < th dose independent rect. 19 2
907 98.92 precipitation 0.1 720 < th dose dependent rect. 19 2
910 98.92 radiation 40.0 90 < th dose dependent rect. 19 12
913 98.93 radiation 40.0 10 < th dose independent rect. 12 8
923 98.95 wind 9.0 720 < th dose independent rect. 21 14
924 98.95 temperature 10.0 270 > th dose dependent rect. 19 2
927 98.95 radiation 40.0 10 < th dose dependent rect. 10 10
941 98.98 humidity 80.0 10 < th dose independent rect. 9 5
947 99.00 temperature 10.0 720 > th dose independent rect. 13 6
948 99.00 atmosphere 1015.0 720 < th dose independent rect. 13 6
949 99.00 temperature 10.0 720 > th dose independent rect. 19 18
950 99.00 atmosphere 995.0 720 > th dose independent rect. 19 18
954 99.02 precipitation 0.1 270 < th dose independent rect. 14 13
958 99.02 precipitation 0.1 270 < th dose dependent rect. 14 13
974 99.05 humidity 50.0 30 > th dose independent rect. 14 6
979 99.06 atmosphere 1010.0 10 < th dose independent rect. 20 5
980 99.06 temperature 20.0 30 > th dose independent rect. 14 6
985 99.08 temperature 25.0 270 < th dose independent rect. 7 5
994 99.12 wind 9.0 270 < th dose independent rect. 13 14