Os09g0332100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0332100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 245.62 | 0.736 | 11.8 | -3.94 | 0.0329 | 2.33 | -0.361 | -3.33 | -0.0238 | 14.9 | 25.74 | 1267 | -- | -- |
| 249.33 | 0.735 | 11.7 | -3.15 | 0.00501 | 2.01 | -0.487 | -- | 0.167 | 13.9 | 25.61 | 1292 | -- | -- |
| 245.99 | 0.73 | 11.8 | -3.92 | 0.0346 | 2.32 | -- | -3.25 | 0.00559 | 15.2 | 25.9 | 1265 | -- | -- |
| 248.89 | 0.735 | 11.7 | -3.11 | 0.042 | 1.98 | -- | -- | 0.166 | 18.4 | 25.7 | 1286 | -- | -- |
| 246.03 | 0.731 | 11.8 | -3.93 | -- | 2.32 | -- | -3.33 | 0.00877 | -- | 25.96 | 1267 | -- | -- |
| 404.86 | 0.943 | 11.7 | -2.45 | 0.312 | -- | 0.637 | -- | 0.326 | 1.47 | -- | -- | -- | -- |
| 406.47 | 0.944 | 11.7 | -2.47 | 0.311 | -- | -- | -- | 0.323 | 1.2 | -- | -- | -- | -- |
| 248.97 | 0.735 | 11.7 | -3.11 | -- | 1.98 | -- | -- | 0.172 | -- | 25.76 | 1283 | -- | -- |
| 481.05 | 1.02 | 11.6 | -- | 0.0607 | 1.32 | -- | -- | 0.762 | 19.7 | 28.4 | 1274 | -- | -- |
| 412.45 | 0.949 | 11.7 | -2.46 | -- | -- | -- | -- | 0.329 | -- | -- | -- | -- | -- |
| 567.05 | 1.11 | 11.6 | -- | 0.27 | -- | -- | -- | 0.598 | 0.851 | -- | -- | -- | -- |
| 481.2 | 1.02 | 11.6 | -- | -- | 1.34 | -- | -- | 0.765 | -- | 28.4 | 1275 | -- | -- |
| 571.61 | 1.12 | 11.6 | -- | -- | -- | -- | -- | 0.602 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 248.96 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 2 | 249.21 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 4 | 249.24 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 9 |
| 8 | 249.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 121 | 250.00 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 176 | 250.45 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 188 | 250.62 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 208 | 250.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 289 | 253.01 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 304 | 253.51 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 19 |
| 305 | 253.54 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 312 | 253.58 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 14 |
| 317 | 253.64 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 10 |
| 362 | 254.40 | temperature | 30 | 1440 | < th | dose independent | sin | 0 | NA |
| 370 | 254.62 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 382 | 254.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 392 | 254.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 18 |
| 397 | 254.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 400 | 254.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 13 | 23 |
| 403 | 254.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 451 | 255.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 452 | 255.17 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 461 | 255.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 476 | 255.19 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 20 |
| 558 | 255.64 | temperature | 30 | 1440 | > th | dose independent | sin | 0 | NA |
| 578 | 255.69 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 638 | 256.16 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 820 | 257.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 859 | 257.91 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 916 | 258.64 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 4 |