Os09g0331900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0331900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 26.69 | 0.243 | 3.03 | -0.0489 | 0.0955 | 0.349 | -0.064 | -1.49 | 0.0114 | 6.22 | 0.009708 | 3180 | -- | -- |
| 28.28 | 0.248 | 3 | -0.0298 | 0.0896 | 0.0574 | -0.102 | -- | 0.00125 | 6.34 | -0.1403 | 4429 | -- | -- |
| 26.7 | 0.241 | 3.03 | -0.0492 | 0.0948 | 0.347 | -- | -1.48 | 0.0115 | 6.31 | 1.015e-06 | 3180 | -- | -- |
| 28.29 | 0.248 | 3 | -0.0374 | 0.089 | 0.0608 | -- | -- | 0.00126 | 6.48 | -2.687e-06 | 4193 | -- | -- |
| 27.17 | 0.243 | 3.03 | -0.0488 | -- | 0.351 | -- | -1.49 | 0.0136 | -- | -0.00261 | 3141 | -- | -- |
| 28.34 | 0.25 | 3 | -0.0167 | 0.0943 | -- | -0.0785 | -- | -0.00462 | 6.88 | -- | -- | -- | -- |
| 28.35 | 0.249 | 3 | -0.0181 | 0.094 | -- | -- | -- | -0.00439 | 6.95 | -- | -- | -- | -- |
| 28.74 | 0.25 | 3 | -0.0332 | -- | 0.0626 | -- | -- | 0.00396 | -- | -0.01872 | 4193 | -- | -- |
| 28.3 | 0.249 | 3 | -- | 0.0952 | -0.231 | -- | -- | -0.00345 | 6.88 | -0.04735 | 4193 | -- | -- |
| 28.82 | 0.251 | 3 | -0.0161 | -- | -- | -- | -- | -0.00264 | -- | -- | -- | -- | -- |
| 28.36 | 0.249 | 3 | -- | 0.0938 | -- | -- | -- | -0.00238 | 6.96 | -- | -- | -- | -- |
| 28.77 | 0.25 | 3 | -- | -- | 0.0516 | -- | -- | 0.0062 | -- | -0.06591 | 4193 | -- | -- |
| 28.82 | 0.251 | 3 | -- | -- | -- | -- | -- | -0.000848 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.03 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 3 | 26.02 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 1 |
| 5 | 26.49 | temperature | 20.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 8 | 26.66 | temperature | 25.0 | 10 | > th | dose independent | rect. | 2 | 4 |
| 9 | 26.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 11 | 26.71 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 12 | 26.71 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 13 | 26.72 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 15 | 26.72 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 17 | 26.75 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 20 | 26.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 30 | 26.76 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 2 |
| 32 | 26.76 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 2 |
| 33 | 26.77 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 36 | 26.77 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 57 | 26.83 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 66 | 26.87 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 2 | 4 |
| 69 | 26.88 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 4 |
| 72 | 26.88 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 4 |
| 76 | 26.89 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 78 | 26.89 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 11 |
| 82 | 26.89 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 4 |
| 84 | 26.89 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 11 |
| 85 | 26.90 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 11 |
| 99 | 26.93 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 102 | 26.93 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 9 |
| 105 | 26.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 107 | 26.94 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 111 | 26.94 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 115 | 26.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 123 | 26.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 128 | 26.96 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 142 | 26.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 11 |
| 162 | 26.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 8 |
| 171 | 26.99 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 5 | 8 |
| 172 | 26.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 8 |
| 173 | 26.99 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 10 | 9 |
| 177 | 27.00 | wind | 1.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 197 | 27.01 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 8 |
| 203 | 27.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 14 |
| 250 | 27.04 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 22 | NA |
| 251 | 27.04 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 22 | NA |
| 268 | 27.04 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 22 | NA |
| 280 | 27.04 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 7 |
| 304 | 27.05 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 312 | 27.05 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 7 |
| 350 | 27.06 | wind | 1.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 368 | 27.06 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 21 | NA |
| 432 | 27.08 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 433 | 27.08 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 458 | 27.08 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 542 | 27.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 545 | 27.10 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 554 | 27.10 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 560 | 27.10 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 588 | 27.11 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 593 | 27.11 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 771 | 27.11 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 776 | 27.11 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 812 | 27.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 4 |
| 992 | 27.13 | humidity | 90.0 | 720 | < th | dose independent | rect. | 3 | 1 |