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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0330700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ankyrin repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.49 (0.0435) R2 : 0.0935
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.628 (0.0916) R2dN8 : 0.121 R2N8 : 0.0935
σ : 0.819
deviance : 308.17
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
288.19 0.798 3.46 0.204 0.362 0.729 0.185 2.77 0.698 14.4 -0.5117 543 -- --
288.78 0.791 3.48 0.175 0.393 1.28 0.0942 -- 0.678 14.4 -0.7161 571 -- --
288.32 0.791 3.46 0.212 0.362 0.692 -- 2.83 0.698 14.4 -0.7303 542 -- --
288.6 0.791 3.48 0.17 0.358 1.41 -- -- 0.705 14.4 -0.6249 557 -- --
295.98 0.801 3.46 0.197 -- 0.712 -- 2.37 0.69 -- 0.0007017 542 -- --
299.7 0.812 3.48 0.317 0.324 -- -0.0387 -- 0.67 14.9 -- -- -- --
299.7 0.811 3.48 0.316 0.324 -- -- -- 0.67 14.9 -- -- -- --
296.05 0.801 3.48 0.166 -- 1.34 -- -- 0.693 -- -0.3676 542 -- --
289.34 0.792 3.48 -- 0.357 1.49 -- -- 0.688 14.4 -0.4318 557 -- --
305.75 0.817 3.49 0.303 -- -- -- -- 0.662 -- -- -- -- --
302.34 0.813 3.49 -- 0.318 -- -- -- 0.635 14.9 -- -- -- --
296.74 0.802 3.48 -- -- 1.42 -- -- 0.678 -- -0.1172 542 -- --
308.17 0.819 3.49 -- -- -- -- -- 0.628 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 282.51 wind 1.0 1440 < th dose dependent rect. 18 1
2 282.66 wind 1.0 1440 < th dose independent rect. 18 1
3 282.96 wind 1.0 1440 > th dose independent rect. 18 1
7 284.63 radiation 1.0 30 < th dose dependent rect. 20 22
8 284.68 temperature 20.0 270 > th dose independent rect. 5 1
9 284.87 radiation 10.0 10 < th dose independent rect. 15 18
11 285.03 radiation 10.0 90 < th dose dependent rect. 5 5
12 285.20 radiation 1.0 30 < th dose independent rect. 20 22
16 285.52 radiation 10.0 10 < th dose independent rect. 5 19
18 285.70 temperature 25.0 10 > th dose independent rect. 5 2
20 285.75 wind 1.0 1440 < th dose independent rect. 13 2
21 285.77 radiation 10.0 90 < th dose independent rect. 5 4
22 285.79 humidity 90.0 1440 > th dose dependent rect. 18 1
23 285.82 radiation 10.0 10 < th dose independent rect. 5 23
25 285.89 wind 1.0 1440 > th dose independent rect. 13 2
30 286.06 radiation 20.0 720 > th dose independent rect. 7 2
31 286.11 radiation 10.0 10 < th dose independent rect. 5 21
38 286.20 radiation 10.0 10 < th dose dependent rect. 6 3
39 286.22 precipitation 0.1 1440 < th dose independent rect. 14 1
40 286.22 precipitation 0.1 1440 < th dose dependent rect. 14 1
56 286.26 humidity 90.0 1440 > th dose dependent rect. 10 4
58 286.27 atmosphere 1000.0 30 > th dose independent rect. 5 15
60 286.28 humidity 90.0 1440 > th dose independent rect. 10 4
63 286.31 humidity 90.0 1440 > th dose independent rect. 13 1
64 286.35 wind 1.0 1440 < th dose dependent rect. 13 2
65 286.38 precipitation 0.1 270 < th dose independent rect. 6 23
66 286.38 precipitation 0.1 270 < th dose dependent rect. 6 23
67 286.40 humidity 90.0 1440 > th dose dependent rect. 13 1
76 286.59 humidity 90.0 1440 < th dose independent rect. 13 1
77 286.59 radiation 10.0 90 < th dose dependent rect. 5 11
82 286.72 wind 7.0 30 < th dose independent rect. 5 15
84 286.77 wind 1.0 1440 < th dose independent rect. 13 4
86 286.88 radiation 10.0 720 > th dose dependent rect. 8 1
88 286.91 precipitation 0.1 720 > th dose independent rect. 23 20
91 286.93 wind 1.0 1440 > th dose independent rect. 13 4
92 286.94 wind 1.0 1440 < th dose dependent rect. 13 4
95 286.96 precipitation 0.1 720 > th dose dependent sin 2 NA
98 287.06 wind 1.0 1440 > th dose independent rect. 16 1
104 287.12 wind 1.0 1440 < th dose dependent rect. 10 7
105 287.12 precipitation 0.1 720 > th dose dependent rect. 23 20
107 287.17 precipitation 0.1 1440 < th dose independent rect. 7 8
109 287.17 precipitation 0.1 1440 < th dose dependent rect. 7 8
111 287.20 wind 1.0 1440 > th dose independent rect. 13 6
112 287.21 radiation 1.0 30 < th dose dependent rect. 20 20
117 287.23 temperature 15.0 270 > th dose dependent rect. 5 1
121 287.26 precipitation 0.1 1440 > th dose independent rect. 6 9
122 287.26 temperature 10.0 30 > th dose dependent rect. 20 9
123 287.27 wind 1.0 1440 < th dose dependent rect. 10 5
126 287.29 wind 1.0 1440 < th dose independent rect. 11 4
127 287.29 radiation 1.0 30 < th dose independent rect. 20 20
130 287.32 humidity 80.0 90 > th dose dependent rect. 5 18
135 287.35 precipitation 0.1 1440 < th dose independent rect. 10 5
136 287.35 precipitation 0.1 1440 < th dose dependent rect. 10 5
137 287.36 radiation 10.0 10 < th dose independent rect. 7 1
140 287.37 wind 1.0 1440 > th dose independent rect. 11 8
144 287.39 wind 1.0 1440 < th dose independent rect. 11 6
152 287.42 humidity 70.0 90 > th dose dependent rect. 5 4
154 287.43 wind 1.0 1440 > th dose independent rect. 11 6
155 287.43 precipitation 0.1 1440 > th dose dependent rect. 13 2
157 287.43 radiation 10.0 10 < th dose dependent rect. 6 11
160 287.44 precipitation 0.1 1440 > th dose dependent rect. 4 11
162 287.45 wind 1.0 1440 > th dose independent rect. 9 11
164 287.47 wind 9.0 30 < th dose dependent rect. 5 15
169 287.50 precipitation 0.1 720 > th dose independent sin 2 NA
170 287.50 precipitation 0.1 720 < th dose independent rect. 22 23
171 287.50 precipitation 0.1 720 < th dose dependent rect. 22 23
174 287.53 radiation 1.0 30 < th dose independent rect. 20 10
179 287.54 radiation 1.0 30 < th dose dependent rect. 20 11
201 287.61 precipitation 0.1 1440 > th dose dependent rect. 6 9
202 287.62 wind 1.0 1440 < th dose independent rect. 9 10
205 287.62 wind 1.0 1440 < th dose dependent rect. 9 11
206 287.63 precipitation 0.1 1440 > th dose independent rect. 14 1
212 287.64 radiation 10.0 10 < th dose independent rect. 5 15
214 287.65 radiation 1.0 30 < th dose dependent rect. 20 18
220 287.69 humidity 80.0 720 < th dose independent rect. 17 1
225 287.70 humidity 80.0 90 > th dose dependent rect. 5 15
226 287.71 wind 1.0 1440 < th dose independent rect. 11 8
234 287.75 wind 1.0 1440 < th dose independent rect. 16 1
243 287.78 wind 1.0 1440 < th dose independent rect. 9 8
248 287.80 radiation 1.0 90 < th dose dependent sin 10 NA
254 287.81 wind 1.0 1440 < th dose independent rect. 13 7
256 287.81 temperature 25.0 10 > th dose dependent rect. 5 1
259 287.82 precipitation 0.1 720 < th dose independent sin 2 NA
261 287.82 precipitation 0.1 720 < th dose dependent sin 2 NA
264 287.83 humidity 80.0 90 > th dose dependent rect. 5 11
279 287.90 atmosphere 1005.0 270 > th dose independent rect. 5 1
302 288.06 radiation 1.0 30 < th dose dependent sin 7 NA
309 288.08 wind 1.0 1440 < th dose independent rect. 9 16
318 288.14 wind 1.0 1440 < th dose dependent rect. 16 1
341 288.27 precipitation 0.1 720 > th dose independent rect. 20 3
343 288.27 precipitation 0.1 720 > th dose dependent rect. 20 3
373 288.33 atmosphere 995.0 30 > th dose dependent rect. 5 15
376 288.34 humidity 80.0 90 > th dose independent rect. 5 11
392 288.35 precipitation 0.1 720 < th dose independent rect. 6 15
393 288.35 precipitation 0.1 720 < th dose dependent rect. 6 15
408 288.38 humidity 80.0 10 > th dose independent rect. 6 11
416 288.38 radiation 1.0 30 < th dose independent rect. 20 18
428 288.41 radiation 10.0 10 < th dose independent rect. 5 11
437 288.43 wind 1.0 1440 > th dose independent rect. 9 16
446 288.46 precipitation 0.1 4320 > th dose dependent rect. 17 3
452 288.49 precipitation 0.1 720 < th dose independent rect. 2 17
455 288.49 precipitation 0.1 720 < th dose dependent rect. 2 17
477 288.52 precipitation 0.1 720 < th dose independent rect. 13 16
479 288.52 precipitation 0.1 720 < th dose dependent rect. 13 16
481 288.53 radiation 1.0 30 > th dose independent sin 10 NA
498 288.58 humidity 90.0 14400 < th dose dependent rect. 1 2
510 288.64 wind 1.0 1440 < th dose independent sin 20 NA
512 288.64 radiation 10.0 270 < th dose independent rect. 5 1
534 288.70 radiation 10.0 10 > th dose independent rect. 15 23
535 288.70 radiation 1.0 90 < th dose dependent rect. 12 18
555 288.74 wind 1.0 1440 > th dose independent rect. 11 14
556 288.75 atmosphere 1000.0 90 > th dose independent rect. 5 4
557 288.75 humidity 80.0 90 > th dose independent rect. 5 14
572 288.76 radiation 1.0 90 < th dose dependent rect. 10 20
585 288.79 humidity 90.0 720 > th dose dependent rect. 13 9
606 288.84 radiation 1.0 30 < th dose independent sin 7 NA
607 288.84 radiation 1.0 30 < th dose independent sin 9 NA
616 288.87 wind 1.0 1440 > th dose independent sin 20 NA
621 288.87 precipitation 0.1 4320 > th dose dependent rect. 11 9
650 288.92 precipitation 0.1 4320 > th dose dependent rect. 24 20
656 288.93 wind 1.0 1440 < th dose dependent rect. 9 16
672 288.97 wind 1.0 1440 < th dose dependent sin 20 NA
685 289.00 radiation 1.0 90 > th dose independent rect. 5 1
688 289.01 humidity 90.0 720 < th dose independent rect. 15 6
709 289.05 radiation 10.0 10 > th dose independent rect. 9 23
721 289.08 radiation 40.0 90 < th dose independent rect. 9 20
732 289.10 humidity 90.0 720 > th dose dependent rect. 20 1
735 289.11 temperature 25.0 270 < th dose independent rect. 16 17
743 289.12 precipitation 0.1 270 > th dose independent rect. 19 21
759 289.15 precipitation 0.1 720 > th dose dependent rect. 17 23
760 289.16 radiation 1.0 90 > th dose independent rect. 18 12
764 289.16 radiation 1.0 90 > th dose dependent rect. 18 12
769 289.17 humidity 80.0 10 > th dose independent rect. 5 15
773 289.17 precipitation 0.1 720 > th dose dependent rect. 19 23
778 289.18 atmosphere 995.0 270 > th dose dependent rect. 5 1
829 289.26 temperature 25.0 270 > th dose independent rect. 20 9
837 289.27 radiation 1.0 10 > th dose dependent rect. 18 1
854 289.29 atmosphere 1000.0 90 > th dose independent rect. 5 18
861 289.30 wind 1.0 4320 < th dose dependent rect. 6 4
881 289.34 humidity 80.0 90 > th dose independent rect. 5 4
882 289.34 precipitation 0.1 30 < th dose independent rect. 20 9
887 289.34 precipitation 0.1 30 < th dose dependent rect. 20 9
905 289.37 precipitation 0.1 720 < th dose independent rect. 15 14
909 289.37 precipitation 0.1 720 < th dose independent rect. 15 23
910 289.37 humidity 90.0 14400 < th dose dependent rect. 24 4
914 289.37 precipitation 0.1 720 < th dose dependent rect. 15 14
917 289.37 precipitation 0.1 720 < th dose dependent rect. 15 23
929 289.40 radiation 1.0 10 > th dose dependent rect. 18 13
934 289.41 radiation 10.0 10 > th dose independent rect. 7 10
937 289.41 humidity 90.0 720 > th dose dependent rect. 19 3
945 289.43 precipitation 0.1 720 > th dose dependent rect. 13 19
963 289.45 precipitation 0.1 720 > th dose dependent no NA NA
970 289.45 precipitation 0.1 720 > th dose dependent rect. 7 23
984 289.46 precipitation 0.1 720 > th dose dependent rect. 13 16
999 289.47 precipitation 0.1 720 > th dose dependent rect. 3 23