Os09g0330200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0330200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.37 | 0.222 | 3.14 | 0.18 | 0.0994 | 0.198 | 0.075 | 0.944 | -0.0967 | 9.73 | 89 | 5857 | -- | -- |
| 23.54 | 0.226 | 3.13 | 0.121 | 0.0989 | 0.259 | 0.109 | -- | -0.11 | 9.48 | 88 | 4350 | -- | -- |
| 22.39 | 0.22 | 3.14 | 0.183 | 0.0995 | 0.197 | -- | 0.945 | -0.0968 | 9.5 | 89 | 5875 | -- | -- |
| 23.55 | 0.226 | 3.14 | 0.118 | 0.0972 | 0.249 | -- | -- | -0.109 | 9.25 | 88.01 | 4348 | -- | -- |
| 22.98 | 0.223 | 3.14 | 0.184 | -- | 0.2 | -- | 0.936 | -0.0943 | -- | 89 | 5876 | -- | -- |
| 24.34 | 0.231 | 3.13 | 0.109 | 0.0975 | -- | 0.0687 | -- | -0.0721 | 9.6 | -- | -- | -- | -- |
| 24.36 | 0.231 | 3.13 | 0.112 | 0.0978 | -- | -- | -- | -0.0721 | 9.4 | -- | -- | -- | -- |
| 24.08 | 0.229 | 3.14 | 0.117 | -- | 0.255 | -- | -- | -0.109 | -- | 87.97 | 4375 | -- | -- |
| 23.91 | 0.228 | 3.14 | -- | 0.0963 | 0.235 | -- | -- | -0.113 | 9.29 | 86 | 4334 | -- | -- |
| 24.92 | 0.233 | 3.13 | 0.111 | -- | -- | -- | -- | -0.0718 | -- | -- | -- | -- | -- |
| 24.69 | 0.232 | 3.13 | -- | 0.0977 | -- | -- | -- | -0.0846 | 9.31 | -- | -- | -- | -- |
| 24.43 | 0.23 | 3.14 | -- | -- | 0.252 | -- | -- | -0.123 | -- | 86.43 | 4361 | -- | -- |
| 25.25 | 0.235 | 3.13 | -- | -- | -- | -- | -- | -0.0841 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.74 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 1 |
| 11 | 21.75 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 17 | 21.76 | wind | 1 | 10 | < th | dose independent | rect. | 13 | 1 |
| 19 | 21.76 | wind | 1 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 31 | 21.86 | humidity | 80 | 14400 | < th | dose dependent | rect. | 4 | 5 |
| 34 | 21.90 | humidity | 80 | 14400 | < th | dose dependent | rect. | 7 | 2 |
| 37 | 22.01 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 39 | 22.04 | radiation | 40 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 79 | 22.11 | humidity | 70 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 81 | 22.20 | humidity | 80 | 14400 | < th | dose dependent | rect. | 24 | 10 |
| 84 | 22.22 | humidity | 70 | 14400 | > th | dose independent | rect. | 6 | 3 |
| 114 | 22.25 | humidity | 70 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 115 | 22.26 | humidity | 70 | 14400 | < th | dose independent | rect. | 6 | 4 |
| 130 | 22.30 | humidity | 50 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 134 | 22.32 | humidity | 90 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 138 | 22.35 | humidity | 70 | 4320 | > th | dose independent | rect. | 10 | 1 |
| 146 | 22.38 | humidity | 90 | 4320 | < th | dose dependent | rect. | 23 | 15 |
| 148 | 22.39 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 159 | 22.40 | humidity | 50 | 4320 | > th | dose dependent | rect. | 23 | 15 |
| 161 | 22.41 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 177 | 22.41 | humidity | 50 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 181 | 22.42 | wind | 1 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 183 | 22.42 | wind | 1 | 14400 | < th | dose dependent | rect. | 4 | 3 |
| 211 | 22.44 | humidity | 60 | 14400 | < th | dose dependent | rect. | 12 | 1 |
| 218 | 22.44 | humidity | 90 | 4320 | < th | dose dependent | rect. | 3 | 12 |
| 242 | 22.46 | humidity | 90 | 4320 | < th | dose dependent | sin | 5 | NA |
| 243 | 22.46 | humidity | 50 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 261 | 22.47 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 7 |
| 274 | 22.47 | humidity | 50 | 4320 | > th | dose dependent | sin | 4 | NA |
| 297 | 22.48 | humidity | 70 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 298 | 22.48 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 319 | 22.49 | humidity | 70 | 4320 | > th | dose independent | sin | 4 | NA |
| 321 | 22.49 | radiation | 40 | 10 | > th | dose independent | rect. | 14 | 1 |
| 407 | 22.50 | humidity | 70 | 4320 | < th | dose independent | rect. | 8 | 5 |
| 487 | 22.52 | humidity | 70 | 4320 | < th | dose independent | sin | 4 | NA |
| 595 | 22.53 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 21 | 23 |
| 826 | 22.57 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 13 | 10 |
| 950 | 22.60 | atmosphere | 1000 | 30 | > th | dose independent | rect. | 10 | 21 |