Os09g0329000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BURP domain containing protein.
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Os09g0329000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BURP domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.06 | 0.379 | 3.05 | -0.173 | 0.0878 | 2.41 | -0.174 | -13.6 | 0.0534 | 5.01 | 32.22 | 2 | -- | -- |
| 66.06 | 0.379 | 3.03 | 0.0413 | 0.0854 | 0.707 | -0.166 | -- | 0.0526 | 5.01 | 32.2 | 2 | -- | -- |
| 65.1 | 0.376 | 3.05 | -0.172 | 0.0896 | 2.38 | -- | -13.4 | 0.0562 | 5.89 | 32.24 | 2 | -- | -- |
| 66.1 | 0.379 | 3.03 | 0.0418 | 0.0887 | 0.709 | -- | -- | 0.0537 | 5.97 | 32.19 | 2 | -- | -- |
| 65.52 | 0.377 | 3.05 | -0.159 | -- | 2.4 | -- | -13.7 | 0.0554 | -- | 32.34 | 2 | -- | -- |
| 68.32 | 0.388 | 3.03 | 0.0566 | 0.017 | -- | -0.307 | -- | 0.0408 | 3.01 | -- | -- | -- | -- |
| 68.44 | 0.387 | 3.03 | 0.0632 | 0.063 | -- | -- | -- | 0.0421 | 7.68 | -- | -- | -- | -- |
| 66.5 | 0.38 | 3.03 | 0.0459 | -- | 0.678 | -- | -- | 0.0548 | -- | 32.28 | 2 | -- | -- |
| 66.15 | 0.379 | 3.03 | -- | 0.0898 | 0.714 | -- | -- | 0.0492 | 5.93 | 32.17 | 2 | -- | -- |
| 68.65 | 0.387 | 3.03 | 0.064 | -- | -- | -- | -- | 0.0431 | -- | -- | -- | -- | -- |
| 68.54 | 0.387 | 3.03 | -- | 0.0636 | -- | -- | -- | 0.0351 | 7.61 | -- | -- | -- | -- |
| 66.55 | 0.38 | 3.03 | -- | -- | 0.683 | -- | -- | 0.0498 | -- | 32.26 | 2 | -- | -- |
| 68.76 | 0.387 | 3.03 | -- | -- | -- | -- | -- | 0.036 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 56.83 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 60.48 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 4 | 61.22 | atmosphere | 1005.0 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 20 | 61.61 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 22 | 61.72 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 2 |
| 23 | 61.72 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 10 | 3 |
| 27 | 61.84 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 31 | 61.89 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 33 | 61.94 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 34 | 61.95 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 37 | 61.95 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 41 | 61.95 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 44 | 61.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 47 | 61.96 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 48 | 61.96 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 53 | 61.96 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 54 | 61.96 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 56 | 61.96 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 61 | 61.96 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 62 | 61.96 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 63 | 61.96 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 68 | 61.96 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 73 | 61.96 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 81 | 61.99 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 84 | 61.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 91 | 62.01 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 152 | 62.15 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 153 | 62.15 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 176 | 62.31 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 177 | 62.32 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 178 | 62.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 181 | 62.32 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 185 | 62.32 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 194 | 62.32 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 195 | 62.32 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 215 | 62.32 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 216 | 62.32 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 296 | 63.03 | temperature | 30.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 378 | 63.47 | humidity | 50.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 386 | 63.55 | temperature | 30.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 388 | 63.59 | humidity | 90.0 | 90 | < th | dose independent | rect. | 2 | 1 |
| 431 | 63.86 | temperature | 30.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 476 | 64.61 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 23 |
| 601 | 65.02 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 630 | 65.15 | temperature | 30.0 | 10 | > th | dose independent | rect. | 10 | 2 |
| 636 | 65.17 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 687 | 65.25 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 747 | 65.37 | radiation | 30.0 | 270 | > th | dose independent | rect. | 7 | 1 |
| 784 | 65.42 | wind | 1.0 | 10 | > th | dose independent | rect. | 21 | 23 |
| 794 | 65.47 | temperature | 30.0 | 270 | < th | dose independent | sin | 8 | NA |
| 796 | 65.48 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 802 | 65.51 | temperature | 25.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 811 | 65.54 | temperature | 30.0 | 270 | > th | dose independent | sin | 8 | NA |
| 821 | 65.57 | wind | 1.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 853 | 65.65 | temperature | 30.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 879 | 65.68 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 22 |
| 937 | 65.73 | wind | 5.0 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 944 | 65.76 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 3 |