Os09g0326100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0326100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein kinase-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 403.16 | 0.943 | 3.73 | 2.18 | 0.693 | -1.83 | 1.32 | 0.825 | 0.269 | 19 | 14.09 | 1134 | -- | -- |
| 403.72 | 0.936 | 3.75 | 2.01 | 0.706 | -1.83 | 1.33 | -- | 0.224 | 19.1 | 11.57 | 1114 | -- | -- |
| 407.59 | 0.94 | 3.73 | 2.18 | 0.714 | -1.85 | -- | 0.968 | 0.28 | 19.2 | 12.21 | 1108 | -- | -- |
| 408.37 | 0.941 | 3.75 | 1.98 | 0.696 | -1.83 | -- | -- | 0.228 | 19.1 | 9.67 | 1132 | -- | -- |
| 429.44 | 0.965 | 3.71 | 2.2 | -- | -1.84 | -- | 0.962 | 0.291 | -- | 12.55 | 1299 | -- | -- |
| 456.46 | 1 | 3.82 | 1.45 | 0.699 | -- | 1.34 | -- | -0.0953 | 17.9 | -- | -- | -- | -- |
| 460.85 | 1.01 | 3.82 | 1.44 | 0.706 | -- | -- | -- | -0.0898 | 17.7 | -- | -- | -- | -- |
| 429.91 | 0.966 | 3.74 | 1.99 | -- | -1.83 | -- | -- | 0.225 | -- | 10.53 | 1293 | -- | -- |
| 498.57 | 1.04 | 3.83 | -- | 0.675 | -0.981 | -- | -- | -0.113 | 18.7 | 5.267 | 1110 | -- | -- |
| 486.74 | 1.03 | 3.81 | 1.42 | -- | -- | -- | -- | -0.106 | -- | -- | -- | -- | -- |
| 515.63 | 1.06 | 3.86 | -- | 0.684 | -- | -- | -- | -0.25 | 17.8 | -- | -- | -- | -- |
| 520.39 | 1.06 | 3.81 | -- | -- | -1 | -- | -- | -0.117 | -- | 7.648 | 1264 | -- | -- |
| 539.9 | 1.08 | 3.85 | -- | -- | -- | -- | -- | -0.264 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 399.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 4 | 399.60 | radiation | 10 | 4320 | < th | dose independent | rect. | 22 | 9 |
| 5 | 399.60 | radiation | 10 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 10 | 399.69 | radiation | 10 | 4320 | < th | dose independent | rect. | 24 | 7 |
| 12 | 399.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 3 |
| 13 | 399.79 | radiation | 10 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 22 | 400.05 | radiation | 10 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 52 | 401.06 | temperature | 10 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 85 | 402.17 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 16 |
| 86 | 402.18 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 122 | 402.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 22 |
| 128 | 403.06 | radiation | 10 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 140 | 403.09 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 145 | 403.17 | temperature | 10 | 1440 | > th | dose dependent | sin | 4 | NA |
| 199 | 403.59 | temperature | 10 | 270 | > th | dose dependent | rect. | 22 | 22 |
| 205 | 403.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 17 |
| 250 | 403.99 | temperature | 30 | 720 | < th | dose dependent | sin | 11 | NA |
| 371 | 404.51 | radiation | 40 | 4320 | < th | dose dependent | rect. | 22 | 8 |
| 441 | 404.70 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 20 |
| 462 | 404.74 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 544 | 404.90 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 558 | 404.92 | radiation | 40 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 607 | 405.00 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 6 |
| 615 | 405.01 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 632 | 405.05 | temperature | 30 | 1440 | < th | dose dependent | sin | 4 | NA |
| 665 | 405.12 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 694 | 405.25 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 16 |
| 702 | 405.27 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 9 |
| 749 | 405.36 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 6 |
| 765 | 405.40 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 16 |
| 786 | 405.45 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 790 | 405.46 | wind | 5 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 826 | 405.53 | radiation | 30 | 4320 | < th | dose independent | rect. | 22 | 10 |
| 849 | 405.60 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 855 | 405.61 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 882 | 405.67 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 8 |
| 886 | 405.68 | wind | 5 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 946 | 405.84 | radiation | 30 | 4320 | < th | dose independent | rect. | 24 | 8 |
| 956 | 405.85 | radiation | 30 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 966 | 405.88 | radiation | 30 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 970 | 405.88 | radiation | 20 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 971 | 405.88 | wind | 5 | 43200 | > th | dose dependent | rect. | 20 | 6 |