Os09g0325800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0325800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.35 | 0.647 | 6.46 | 5.49 | 1.24 | 0.304 | 1.07 | -3.24 | 0.701 | 19.1 | 26.59 | 271 | -- | -- |
| 195.32 | 0.651 | 6.52 | 5.09 | 1.2 | 1.67 | 1.25 | -- | 0.539 | 19 | 19.21 | 375 | -- | -- |
| 191.5 | 0.645 | 6.44 | 5.61 | 1.24 | 0.243 | -- | -3.9 | 0.73 | 19.2 | 27.1 | 370 | -- | -- |
| 201.24 | 0.661 | 6.53 | 5.01 | 1.22 | 1.59 | -- | -- | 0.552 | 19.3 | 19.21 | 388 | -- | -- |
| 246.71 | 0.732 | 6.44 | 5.41 | -- | -0.993 | -- | -5.64 | 0.533 | -- | 45.96 | 436 | -- | -- |
| 206.58 | 0.674 | 6.54 | 4.82 | 1.19 | -- | 1.65 | -- | 0.469 | 19.1 | -- | -- | -- | -- |
| 213.51 | 0.684 | 6.54 | 4.78 | 1.19 | -- | -- | -- | 0.471 | 19.3 | -- | -- | -- | -- |
| 270.33 | 0.766 | 6.55 | 4.53 | -- | -1.09 | -- | -- | 0.292 | -- | 37.2 | 464 | -- | -- |
| 792.34 | 1.32 | 6.68 | -- | 1.16 | -2.15 | -- | -- | -0.126 | 19.8 | 19.21 | 388 | -- | -- |
| 288.57 | 0.794 | 6.52 | 4.76 | -- | -- | -- | -- | 0.451 | -- | -- | -- | -- | -- |
| 816.55 | 1.34 | 6.66 | -- | 1.15 | -- | -- | -- | -0.0613 | 19.5 | -- | -- | -- | -- |
| 766.06 | 1.29 | 6.71 | -- | -- | -2.68 | -- | -- | -0.401 | -- | 35.73 | 568 | -- | -- |
| 886.87 | 1.39 | 6.63 | -- | -- | -- | -- | -- | -0.0772 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 176.27 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 22 |
| 2 | 176.63 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 17 |
| 3 | 177.09 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 4 | 177.34 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 5 | 177.44 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 7 | 177.55 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 7 |
| 12 | 177.85 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 18 |
| 14 | 177.95 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 15 |
| 17 | 178.03 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 7 |
| 18 | 178.08 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 15 |
| 19 | 178.12 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 4 |
| 24 | 178.20 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 8 |
| 27 | 178.28 | radiation | 1.0 | 270 | < th | dose dependent | sin | 21 | NA |
| 46 | 178.85 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 14 |
| 64 | 179.26 | humidity | 70.0 | 270 | > th | dose independent | rect. | 18 | 15 |
| 65 | 179.32 | wind | 7.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 81 | 179.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 16 | 7 |
| 84 | 179.70 | radiation | 1.0 | 270 | < th | dose independent | sin | 20 | NA |
| 97 | 179.85 | wind | 7.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 98 | 179.86 | temperature | 15.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 100 | 179.87 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 17 |
| 124 | 180.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 127 | 180.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 15 |
| 140 | 180.37 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 2 |
| 148 | 180.42 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 153 | 180.46 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 16 |
| 170 | 180.79 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 18 |
| 185 | 181.07 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 16 |
| 189 | 181.11 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 18 |
| 191 | 181.11 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 18 |
| 195 | 181.22 | radiation | 1.0 | 270 | > th | dose independent | sin | 20 | NA |
| 196 | 181.24 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 212 | 181.43 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 20 |
| 214 | 181.44 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 9 |
| 232 | 181.51 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 234 | 181.54 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 4 |
| 237 | 181.60 | wind | 9.0 | 270 | < th | dose dependent | rect. | 17 | 6 |
| 249 | 181.74 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 4 |
| 255 | 181.81 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 4 |
| 263 | 181.83 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 4 |
| 274 | 181.89 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 22 |
| 278 | 181.92 | wind | 9.0 | 270 | < th | dose independent | rect. | 10 | 8 |
| 285 | 181.95 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 6 |
| 286 | 181.95 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 6 |
| 298 | 182.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 10 | 8 |
| 299 | 182.06 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 10 | 8 |
| 301 | 182.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 16 |
| 303 | 182.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 308 | 182.15 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 334 | 182.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 22 |
| 339 | 182.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 10 | 8 |
| 340 | 182.31 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 18 |
| 342 | 182.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 10 | 8 |
| 345 | 182.34 | temperature | 15.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 348 | 182.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 17 |
| 368 | 182.44 | radiation | 40.0 | 270 | < th | dose independent | rect. | 18 | 15 |
| 377 | 182.46 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 384 | 182.51 | wind | 7.0 | 270 | < th | dose independent | rect. | 19 | 2 |
| 387 | 182.53 | wind | 1.0 | 270 | > th | dose independent | rect. | 23 | 18 |
| 388 | 182.53 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 2 |
| 394 | 182.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 415 | 182.58 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 7 |
| 426 | 182.67 | wind | 1.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 435 | 182.73 | humidity | 70.0 | 10 | > th | dose independent | rect. | 19 | 5 |
| 440 | 182.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 17 | 6 |
| 460 | 182.85 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 1 | 8 |
| 474 | 182.97 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 2 |
| 487 | 183.00 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 4 |
| 493 | 183.02 | wind | 1.0 | 270 | > th | dose independent | rect. | 19 | 2 |
| 494 | 183.02 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 20 |
| 495 | 183.02 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 20 |
| 513 | 183.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 4 |
| 516 | 183.23 | temperature | 15.0 | 90 | > th | dose independent | rect. | 1 | 18 |
| 524 | 183.27 | radiation | 30.0 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 539 | 183.30 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 18 | 6 |
| 540 | 183.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 4 |
| 542 | 183.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 4 |
| 546 | 183.35 | humidity | 90.0 | 270 | < th | dose independent | rect. | 11 | 7 |
| 555 | 183.42 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 14 |
| 564 | 183.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 16 |
| 566 | 183.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 16 |
| 573 | 183.53 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 611 | 183.73 | wind | 1.0 | 270 | > th | dose independent | rect. | 17 | 6 |
| 612 | 183.73 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 2 |
| 625 | 183.80 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 10 |
| 626 | 183.80 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 10 |
| 641 | 183.89 | wind | 1.0 | 270 | > th | dose independent | rect. | 10 | 8 |
| 643 | 183.91 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 647 | 183.93 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 6 |
| 669 | 184.01 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 1 | 4 |
| 679 | 184.05 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 697 | 184.11 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 717 | 184.16 | humidity | 90.0 | 90 | > th | dose independent | rect. | 11 | 14 |
| 719 | 184.16 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 1 | 18 |
| 811 | 184.35 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 8 | 16 |
| 814 | 184.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 7 |
| 815 | 184.36 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 816 | 184.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 7 |
| 819 | 184.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 7 |
| 820 | 184.36 | radiation | 20.0 | 270 | < th | dose independent | rect. | 22 | 7 |
| 838 | 184.42 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 2 |
| 841 | 184.42 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 2 |
| 847 | 184.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 8 |
| 947 | 184.75 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 17 |
| 962 | 184.80 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 1 | 18 |
| 964 | 184.80 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 978 | 184.85 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 22 |
| 984 | 184.85 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 22 |
| 985 | 184.86 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 8 | 3 |
| 993 | 184.89 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 15 |