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Os09g0325300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.16 (0.0242) R2 : 0.27
β1 : 0.836 (0.0887) R2dD : 0.148 R2D : 0.0308
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.545 (0.0517) R2dN8 : 0.239 R2N8 : 0.122
σ : 0.455
deviance : 94.64
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
70.41 0.394 6.16 1.11 0.478 -0.945 -0.508 -0.125 0.494 12 49.69 4632 -- --
70.38 0.391 6.16 1.11 0.475 -0.974 -0.519 -- 0.493 12 49.58 4731 -- --
71.46 0.394 6.17 1.08 0.482 -0.91 -- -0.204 0.495 12.3 49.14 4649 -- --
71.45 0.394 6.16 1.09 0.481 -0.963 -- -- 0.493 12.3 49.67 4713 -- --
85.91 0.432 6.17 1.11 -- -1.16 -- 0.365 0.479 -- 49.81 4743 -- --
78.05 0.414 6.15 0.869 0.499 -- -0.435 -- 0.554 12 -- -- -- --
78.83 0.416 6.15 0.852 0.501 -- -- -- 0.553 12.2 -- -- -- --
85.95 0.432 6.17 1.09 -- -1.04 -- -- 0.482 -- 49.96 4731 -- --
80.41 0.418 6.19 -- 0.523 -0.775 -- -- 0.365 12.9 47.97 35022 -- --
94.64 0.455 6.16 0.836 -- -- -- -- 0.545 -- -- -- -- --
97.97 0.463 6.17 -- 0.49 -- -- -- 0.458 12.1 -- -- -- --
89.04 0.439 6.2 -- -- -0.965 -- -- 0.411 -- 56 29705 -- --
113.06 0.496 6.18 -- -- -- -- -- 0.453 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 67.23 temperature 10.0 10 > th dose dependent rect. 7 19
2 67.24 temperature 30.0 10 < th dose dependent rect. 2 21
4 67.48 temperature 30.0 10 < th dose dependent rect. 2 16
11 67.80 temperature 25.0 270 < th dose independent rect. 24 18
13 67.88 temperature 10.0 270 > th dose dependent rect. 6 18
21 67.93 temperature 25.0 270 < th dose independent rect. 24 11
27 68.04 wind 7.0 270 < th dose independent rect. 6 18
28 68.05 temperature 25.0 90 < th dose independent rect. 2 17
29 68.05 wind 9.0 270 < th dose independent rect. 3 23
35 68.16 temperature 25.0 30 < th dose independent rect. 2 6
36 68.16 temperature 25.0 90 < th dose independent rect. 2 9
42 68.20 temperature 25.0 270 < th dose independent rect. 24 13
46 68.26 temperature 10.0 270 > th dose dependent rect. 4 9
50 68.34 wind 1.0 270 > th dose independent rect. 2 1
52 68.34 temperature 25.0 90 < th dose independent rect. 2 20
61 68.42 wind 7.0 30 < th dose independent rect. 7 19
64 68.43 wind 5.0 10 < th dose dependent rect. 2 5
79 68.55 temperature 25.0 270 < th dose independent rect. 2 1
92 68.63 temperature 30.0 270 < th dose dependent rect. 1 4
103 68.72 wind 9.0 14400 > th dose dependent rect. 12 1
104 68.73 wind 1.0 270 > th dose independent rect. 24 6
106 68.73 temperature 30.0 10 < th dose dependent rect. 2 6
111 68.76 wind 1.0 270 > th dose independent rect. 1 3
118 68.79 temperature 30.0 270 < th dose dependent rect. 24 6
123 68.82 humidity 80.0 14400 < th dose dependent rect. 6 1
143 68.92 atmosphere 995.0 270 > th dose dependent rect. 24 6
149 68.96 temperature 30.0 90 < th dose dependent rect. 1 10
169 69.04 precipitation 0.1 10 < th dose independent rect. 2 5
173 69.04 precipitation 0.1 10 < th dose dependent rect. 2 5
176 69.05 atmosphere 995.0 270 > th dose dependent rect. 2 1
178 69.06 precipitation 0.1 270 < th dose independent rect. 24 6
181 69.06 precipitation 0.1 270 < th dose dependent rect. 24 6
185 69.09 atmosphere 1000.0 10 > th dose independent rect. 2 21
187 69.12 humidity 80.0 14400 < th dose independent rect. 6 1
193 69.13 atmosphere 995.0 10 > th dose dependent rect. 2 5
199 69.16 wind 5.0 10 < th dose independent rect. 2 5
202 69.18 atmosphere 1005.0 90 > th dose independent rect. 1 5
203 69.18 wind 9.0 14400 < th dose independent rect. 5 8
206 69.19 atmosphere 1005.0 270 > th dose independent rect. 2 1
209 69.20 wind 3.0 43200 > th dose independent rect. 1 2
215 69.23 humidity 80.0 14400 > th dose independent rect. 6 1
225 69.25 wind 7.0 270 < th dose independent rect. 24 6
230 69.27 temperature 30.0 270 < th dose dependent rect. 2 1
251 69.33 atmosphere 1000.0 10 > th dose independent rect. 2 5
253 69.33 temperature 10.0 270 > th dose independent rect. 24 6
256 69.33 humidity 50.0 270 > th dose independent rect. 24 6
260 69.33 atmosphere 1015.0 270 < th dose independent rect. 24 6
261 69.33 radiation 20.0 270 < th dose independent rect. 24 6
264 69.33 temperature 10.0 270 > th dose independent rect. 6 18
281 69.36 wind 7.0 270 < th dose independent rect. 2 1
296 69.39 radiation 40.0 270 < th dose dependent rect. 24 6
298 69.39 wind 9.0 270 < th dose dependent rect. 5 8
300 69.39 wind 9.0 270 < th dose dependent rect. 6 18
303 69.41 humidity 50.0 270 > th dose independent rect. 6 18
304 69.41 precipitation 0.1 10 < th dose independent rect. 7 19
308 69.41 precipitation 0.1 10 < th dose dependent rect. 7 19
319 69.44 precipitation 0.1 270 < th dose independent rect. 2 1
321 69.44 wind 1.0 10 > th dose independent rect. 23 15
324 69.44 precipitation 0.1 270 < th dose dependent rect. 2 1
340 69.48 temperature 10.0 270 > th dose independent rect. 2 1
343 69.48 humidity 50.0 270 > th dose independent rect. 2 1
347 69.48 atmosphere 1010.0 270 < th dose independent rect. 2 1
349 69.48 radiation 1.0 270 < th dose independent rect. 2 1
358 69.48 temperature 10.0 270 > th dose independent rect. 3 23
359 69.48 radiation 1.0 270 < th dose dependent rect. 2 1
365 69.48 temperature 30.0 10 < th dose dependent rect. 2 12
371 69.50 wind 1.0 43200 > th dose dependent rect. 1 1
375 69.51 temperature 10.0 10 > th dose independent rect. 2 5
378 69.51 humidity 50.0 10 > th dose independent rect. 2 5
382 69.51 atmosphere 1015.0 10 < th dose independent rect. 2 5
383 69.51 radiation 20.0 10 < th dose independent rect. 2 5
386 69.51 temperature 10.0 10 > th dose independent rect. 7 19
402 69.54 wind 5.0 43200 < th dose dependent rect. 1 1
404 69.54 radiation 1.0 270 < th dose dependent rect. 24 10
417 69.58 radiation 10.0 14400 < th dose dependent rect. 24 3
424 69.60 wind 3.0 43200 < th dose independent rect. 1 2
427 69.60 radiation 40.0 10 < th dose dependent rect. 2 5
432 69.61 wind 9.0 14400 < th dose independent rect. 10 3
436 69.61 precipitation 0.1 270 < th dose independent rect. 6 18
437 69.61 humidity 50.0 10 > th dose independent rect. 7 19
438 69.61 atmosphere 995.0 270 > th dose dependent rect. 1 3
442 69.61 precipitation 0.1 270 < th dose dependent rect. 6 18
445 69.62 wind 9.0 14400 > th dose independent rect. 5 8
448 69.62 temperature 30.0 10 < th dose dependent rect. 2 10
455 69.64 radiation 1.0 270 < th dose independent rect. 24 6
483 69.68 radiation 1.0 270 < th dose independent rect. 24 11
486 69.68 humidity 60.0 10 > th dose dependent rect. 23 3
487 69.68 humidity 50.0 10 > th dose dependent rect. 2 5
489 69.69 wind 5.0 270 < th dose independent rect. 5 8
543 69.76 wind 9.0 14400 > th dose independent rect. 10 3
552 69.77 wind 9.0 1440 < th dose independent rect. 3 5
554 69.77 temperature 10.0 1440 > th dose independent rect. 3 5
559 69.77 temperature 30.0 1440 < th dose independent rect. 3 5
564 69.77 humidity 50.0 1440 > th dose independent rect. 3 5
572 69.77 atmosphere 995.0 1440 > th dose independent rect. 3 5
583 69.77 temperature 10.0 1440 > th dose independent rect. 8 19
688 69.87 wind 1.0 14400 < th dose dependent rect. 1 3
722 69.92 wind 7.0 270 < th dose independent rect. 20 15
732 69.94 precipitation 0.1 30 < th dose independent rect. 2 21
739 69.94 precipitation 0.1 30 < th dose dependent rect. 2 21
741 69.95 humidity 60.0 270 > th dose independent rect. 20 15
744 69.96 wind 3.0 14400 < th dose independent rect. 5 1
760 69.98 wind 9.0 14400 > th dose dependent rect. 5 8
793 70.00 wind 9.0 14400 > th dose independent rect. 1 12
809 70.02 wind 3.0 14400 > th dose independent rect. 5 1
820 70.03 wind 3.0 14400 > th dose independent rect. 4 3
829 70.03 wind 9.0 14400 > th dose dependent rect. 10 3
837 70.04 humidity 50.0 270 > th dose dependent rect. 2 1
856 70.06 radiation 30.0 10 < th dose dependent rect. 2 8
873 70.09 wind 3.0 14400 > th dose independent rect. 2 5
916 70.14 radiation 20.0 270 < th dose dependent rect. 24 9
939 70.18 wind 1.0 10 > th dose independent rect. 23 3
963 70.20 wind 7.0 10 < th dose independent rect. 23 3
966 70.20 temperature 10.0 10 > th dose independent rect. 23 3
967 70.20 temperature 30.0 10 < th dose independent rect. 23 3
968 70.20 humidity 50.0 10 > th dose independent rect. 23 3
971 70.20 atmosphere 995.0 10 > th dose independent rect. 23 3
972 70.20 radiation 1.0 10 < th dose independent rect. 23 3
983 70.20 temperature 10.0 10 > th dose independent rect. 2 21
985 70.20 atmosphere 1015.0 10 < th dose independent rect. 2 21
986 70.20 radiation 1.0 10 < th dose dependent rect. 23 3