Os09g0322800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os09g0322800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 366.91 | 0.9 | 3.63 | 0.54 | 0.247 | 4.58 | 0.476 | -9.81 | 0.0419 | 6.53 | 0.7999 | 10 | 14 | 8.98 |
| 367.98 | 0.9 | 3.62 | 0.62 | 0.233 | 5.4 | 0.43 | -- | 0.0393 | 6.29 | 0.8321 | 2 | 14.4 | 9.45 |
| 367.39 | 0.893 | 3.63 | 0.551 | 0.25 | 4.6 | -- | -9.97 | 0.0422 | 7.07 | 0.8 | 10 | 14 | 9.03 |
| 368.34 | 0.9 | 3.62 | 0.627 | 0.238 | 5.44 | -- | -- | 0.0386 | 6.92 | 0.4001 | 2 | 14.9 | 9.03 |
| 370.65 | 0.897 | 3.63 | 0.555 | -- | 4.49 | -- | -9.96 | 0.045 | -- | 0.8 | 10 | 14.3 | 9.14 |
| 396.84 | 0.934 | 3.62 | 0.573 | 0.199 | -- | 0.6 | -- | 0.0202 | 5.81 | -- | -- | -- | -- |
| 397.67 | 0.934 | 3.62 | 0.578 | 0.204 | -- | -- | -- | 0.0181 | 6.32 | -- | -- | -- | -- |
| 371.29 | 0.901 | 3.62 | 0.631 | -- | 5.36 | -- | -- | 0.0428 | -- | 0.4001 | 2 | 14.9 | 9.03 |
| 378.67 | 0.911 | 3.63 | -- | 0.244 | 5.29 | -- | -- | -0.0316 | 6.75 | 0.256 | 2 | 14.6 | 9.04 |
| 399.84 | 0.934 | 3.63 | 0.584 | -- | -- | -- | -- | 0.0225 | -- | -- | -- | -- | -- |
| 406.49 | 0.943 | 3.64 | -- | 0.212 | -- | -- | -- | -0.0463 | 6.17 | -- | -- | -- | -- |
| 381.77 | 0.913 | 3.64 | -- | -- | 5.21 | -- | -- | -0.0277 | -- | 0.4001 | 2 | 14.9 | 9.03 |
| 408.83 | 0.944 | 3.64 | -- | -- | -- | -- | -- | -0.0423 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 367.38 | wind | 1.0 | 10 | < th | dose dependent | rect. | 15 | 8 |
| 2 | 367.42 | wind | 1.0 | 10 | < th | dose dependent | rect. | 21 | 2 |
| 9 | 367.98 | wind | 1.0 | 10 | < th | dose independent | rect. | 22 | 1 |
| 17 | 374.56 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 23 | 375.13 | wind | 1.0 | 10 | < th | dose independent | rect. | 15 | 8 |
| 52 | 380.80 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 55 | 382.03 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 96 | 382.03 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 137 | 382.41 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 140 | 382.78 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 147 | 382.78 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 154 | 382.95 | atmosphere | 995.0 | 720 | < th | dose independent | sin | 6 | NA |
| 176 | 383.69 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 13 | 1 |
| 184 | 383.83 | atmosphere | 995.0 | 720 | < th | dose dependent | sin | 6 | NA |
| 194 | 384.03 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 199 | 384.15 | temperature | 25.0 | 30 | > th | dose independent | rect. | 16 | 7 |
| 202 | 384.26 | radiation | 40.0 | 90 | < th | dose independent | rect. | 1 | 11 |
| 206 | 384.31 | radiation | 30.0 | 10 | < th | dose independent | rect. | 11 | 10 |
| 210 | 384.38 | wind | 1.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 212 | 384.38 | wind | 1.0 | 10 | < th | dose dependent | rect. | 13 | 1 |
| 219 | 384.54 | radiation | 30.0 | 10 | < th | dose independent | rect. | 11 | 12 |
| 258 | 385.00 | radiation | 30.0 | 10 | > th | dose dependent | sin | 14 | NA |
| 259 | 385.01 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 9 | 4 |
| 261 | 385.11 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 14 |
| 262 | 385.12 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 11 | 1 |
| 263 | 385.15 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 282 | 385.17 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 284 | 385.22 | radiation | 1.0 | 270 | > th | dose independent | rect. | 18 | 1 |
| 294 | 385.24 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 7 | NA |
| 295 | 385.24 | radiation | 30.0 | 270 | > th | dose independent | rect. | 11 | 1 |
| 309 | 385.47 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 1 |
| 310 | 385.47 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 320 | 385.66 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 1 | NA |
| 344 | 385.77 | radiation | 40.0 | 270 | > th | dose independent | rect. | 9 | 4 |
| 349 | 385.87 | humidity | 90.0 | 10 | < th | dose independent | rect. | 16 | 7 |
| 357 | 385.94 | wind | 1.0 | 10 | > th | dose independent | rect. | 5 | 11 |
| 376 | 385.96 | radiation | 40.0 | 90 | < th | dose independent | rect. | 1 | 22 |
| 378 | 385.99 | radiation | 30.0 | 10 | > th | dose independent | rect. | 12 | 1 |
| 380 | 386.01 | radiation | 40.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 406 | 386.17 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 23 | NA |
| 451 | 386.34 | radiation | 40.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 453 | 386.37 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 458 | 386.41 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 7 |
| 459 | 386.42 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 468 | 386.50 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 13 | 10 |
| 471 | 386.52 | humidity | 80.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 479 | 386.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 485 | 386.61 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 16 | 7 |
| 487 | 386.66 | radiation | 40.0 | 90 | > th | dose independent | rect. | 11 | 23 |
| 488 | 386.67 | radiation | 40.0 | 10 | > th | dose independent | sin | 14 | NA |
| 511 | 386.68 | wind | 3.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 516 | 386.72 | wind | 7.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 519 | 386.74 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 23 |
| 522 | 386.75 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 13 | 5 |
| 526 | 386.77 | wind | 1.0 | 270 | < th | dose independent | rect. | 21 | 1 |
| 537 | 386.81 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 549 | 386.87 | radiation | 40.0 | 90 | < th | dose independent | rect. | 9 | 11 |
| 557 | 386.93 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 12 | 14 |
| 583 | 386.97 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 14 |
| 594 | 387.03 | atmosphere | 995.0 | 720 | > th | dose independent | no | NA | NA |
| 599 | 387.05 | wind | 9.0 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 601 | 387.06 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 24 | 12 |
| 606 | 387.09 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 16 | 14 |
| 613 | 387.13 | radiation | 40.0 | 90 | > th | dose independent | sin | 19 | NA |
| 673 | 387.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 675 | 387.27 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 676 | 387.27 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 12 | 1 |
| 677 | 387.27 | radiation | 1.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 678 | 387.27 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 1 |
| 679 | 387.27 | radiation | 30.0 | 10 | < th | dose independent | rect. | 11 | 18 |
| 681 | 387.27 | temperature | 10.0 | 30 | > th | dose independent | rect. | 13 | 23 |
| 682 | 387.27 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 1 |
| 686 | 387.30 | humidity | 80.0 | 30 | > th | dose independent | rect. | 6 | 20 |
| 699 | 387.36 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 12 | 1 |
| 704 | 387.38 | atmosphere | 995.0 | 720 | < th | dose independent | no | NA | NA |
| 896 | 387.38 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 1 |
| 920 | 387.41 | atmosphere | 995.0 | 720 | < th | dose dependent | no | NA | NA |