Os09g0321300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os09g0321300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.75 | 0.596 | 13.8 | -0.848 | 1.83 | -0.532 | -0.0669 | -3.71 | -0.304 | 18.7 | 20.1 | 5895 | -- | -- |
| 173.3 | 0.613 | 13.6 | -0.576 | 1.83 | 0.443 | 0.104 | -- | -0.241 | 18.6 | 20.3 | 10936 | -- | -- |
| 160.73 | 0.59 | 13.8 | -0.838 | 1.83 | -0.546 | -- | -3.74 | -0.303 | 18.7 | 20.07 | 5987 | -- | -- |
| 170.02 | 0.607 | 13.6 | -0.613 | 1.84 | 0.828 | -- | -- | -0.236 | 18.6 | 15.83 | 11017 | -- | -- |
| 335.2 | 0.853 | 13.7 | -0.783 | -- | -0.573 | -- | -3.51 | -0.28 | -- | 20 | 6082 | -- | -- |
| 177.69 | 0.625 | 13.6 | -0.192 | 1.82 | -- | -0.0169 | -- | -0.109 | 18.6 | -- | -- | -- | -- |
| 177.69 | 0.624 | 13.6 | -0.191 | 1.82 | -- | -- | -- | -0.109 | 18.6 | -- | -- | -- | -- |
| 344.64 | 0.865 | 13.6 | -0.69 | -- | 0.629 | -- | -- | -0.272 | -- | 11.74 | 47520 | -- | -- |
| 176.43 | 0.619 | 13.6 | -- | 1.82 | 0.553 | -- | -- | -0.116 | 18.6 | 15.1 | 8958 | -- | -- |
| 351.24 | 0.876 | 13.6 | -0.234 | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
| 178.66 | 0.625 | 13.6 | -- | 1.83 | -- | -- | -- | -0.0882 | 18.6 | -- | -- | -- | -- |
| 351.46 | 0.873 | 13.6 | -- | -- | 0.245 | -- | -- | -0.153 | -- | 14.2 | 26437 | -- | -- |
| 352.69 | 0.877 | 13.6 | -- | -- | -- | -- | -- | -0.12 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 151.18 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 4 | 151.64 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 11 |
| 7 | 151.76 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 12 |
| 40 | 153.04 | wind | 3 | 14400 | < th | dose independent | sin | 5 | NA |
| 53 | 153.34 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 19 |
| 77 | 153.72 | wind | 3 | 14400 | > th | dose independent | sin | 5 | NA |
| 80 | 153.77 | wind | 3 | 14400 | < th | dose dependent | sin | 4 | NA |
| 87 | 153.87 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 17 |
| 101 | 154.01 | wind | 3 | 14400 | < th | dose dependent | rect. | 19 | 19 |
| 126 | 154.37 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 19 |
| 136 | 154.46 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 139 | 154.49 | wind | 9 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 179 | 154.85 | wind | 3 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 180 | 154.86 | wind | 3 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 204 | 155.09 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 5 |
| 206 | 155.10 | wind | 3 | 14400 | < th | dose independent | rect. | 2 | 2 |
| 210 | 155.14 | humidity | 80 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 225 | 155.22 | wind | 7 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 232 | 155.27 | wind | 3 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 234 | 155.28 | humidity | 80 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 235 | 155.28 | wind | 3 | 14400 | < th | dose dependent | rect. | 8 | 5 |
| 286 | 155.65 | humidity | 80 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 300 | 155.79 | humidity | 80 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 304 | 155.79 | wind | 9 | 14400 | < th | dose dependent | rect. | 5 | 8 |
| 308 | 155.82 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 309 | 155.83 | wind | 3 | 14400 | > th | dose independent | rect. | 2 | 2 |
| 313 | 155.83 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 13 |
| 316 | 155.86 | humidity | 80 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 359 | 156.07 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 13 |
| 373 | 156.12 | wind | 3 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 375 | 156.13 | wind | 9 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 379 | 156.15 | humidity | 80 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 385 | 156.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 2 |
| 397 | 156.22 | humidity | 80 | 14400 | < th | dose dependent | rect. | 24 | 6 |
| 398 | 156.23 | humidity | 80 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 404 | 156.25 | humidity | 80 | 14400 | < th | dose independent | rect. | 24 | 6 |
| 405 | 156.25 | humidity | 80 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 413 | 156.29 | wind | 3 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 423 | 156.32 | wind | 9 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 443 | 156.41 | temperature | 25 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 542 | 156.75 | humidity | 80 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 556 | 156.78 | humidity | 80 | 14400 | > th | dose independent | rect. | 1 | 4 |
| 577 | 156.87 | temperature | 20 | 10 | > th | dose dependent | sin | 13 | NA |
| 601 | 156.98 | wind | 9 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 630 | 157.06 | wind | 3 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 637 | 157.09 | wind | 1 | 14400 | > th | dose dependent | sin | 5 | NA |
| 645 | 157.13 | temperature | 20 | 90 | > th | dose dependent | sin | 14 | NA |
| 651 | 157.15 | wind | 1 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 701 | 157.32 | wind | 9 | 14400 | < th | dose dependent | sin | 5 | NA |
| 721 | 157.37 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 732 | 157.41 | wind | 7 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 753 | 157.47 | wind | 3 | 14400 | > th | dose independent | rect. | 21 | 10 |
| 805 | 157.64 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 806 | 157.64 | wind | 1 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 820 | 157.68 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 10 |
| 857 | 157.80 | wind | 3 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 868 | 157.86 | wind | 3 | 14400 | < th | dose independent | rect. | 10 | 23 |
| 874 | 157.87 | wind | 3 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 880 | 157.90 | wind | 1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 916 | 158.03 | wind | 3 | 14400 | < th | dose dependent | no | NA | NA |
| 953 | 158.15 | wind | 3 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 966 | 158.20 | wind | 3 | 14400 | < th | dose independent | no | NA | NA |