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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os09g0315600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Concanavalin A-like lectin/glucanase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.0169) R2 : 0.0384
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.152 (0.0356) R2dN8 : 0.0496 R2N8 : 0.0384
σ : 0.319
deviance : 46.62
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.81 0.315 3.07 -0.125 0.0625 -0.214 -0.0989 0.858 0.134 8.14 1.023 16 -- --
45.42 0.314 3.06 -0.0886 0.0681 -0.141 -0.109 -- 0.148 7.86 1.118 15 -- --
44.84 0.312 3.07 -0.128 0.0618 -0.217 -- 0.862 0.134 8.5 1.031 16 -- --
45.45 0.314 3.06 -0.0918 0.0659 -0.144 -- -- 0.146 8.26 1.1 15 -- --
45.04 0.313 3.07 -0.129 -- -0.214 -- 0.809 0.135 -- 1.1 16 -- --
45.91 0.318 3.06 -0.0726 0.0996 -- -0.16 -- 0.142 6.51 -- -- -- --
45.97 0.318 3.06 -0.0747 0.099 -- -- -- 0.142 6.72 -- -- -- --
45.65 0.315 3.06 -0.099 -- -0.139 -- -- 0.149 -- 1.3 15 -- --
45.68 0.315 3.06 -- 0.0692 -0.13 -- -- 0.155 8.16 1.156 15 -- --
46.48 0.319 3.06 -0.0724 -- -- -- -- 0.144 -- -- -- -- --
46.12 0.318 3.06 -- 0.0981 -- -- -- 0.15 6.77 -- -- -- --
45.92 0.316 3.06 -- -- -0.129 -- -- 0.16 -- 1.326 15 -- --
46.62 0.319 3.06 -- -- -- -- -- 0.152 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 42.61 atmosphere 1005.0 10 > th dose dependent rect. 2 6
3 42.63 humidity 90.0 90 < th dose independent rect. 2 5
4 42.75 atmosphere 1005.0 90 > th dose dependent rect. 2 1
5 42.81 atmosphere 1005.0 30 > th dose dependent rect. 6 1
9 42.91 radiation 1.0 30 > th dose dependent rect. 6 1
11 42.94 wind 3.0 30 < th dose dependent rect. 6 1
13 42.96 radiation 1.0 43200 < th dose dependent rect. 3 1
19 43.03 wind 3.0 30 < th dose independent rect. 6 1
21 43.04 temperature 30.0 30 < th dose dependent rect. 6 1
25 43.09 temperature 25.0 10 > th dose independent rect. 6 1
27 43.10 humidity 90.0 30 < th dose independent rect. 6 1
28 43.10 humidity 60.0 30 > th dose dependent rect. 6 1
30 43.11 atmosphere 1005.0 30 > th dose independent rect. 6 1
32 43.13 wind 1.0 30 > th dose independent rect. 6 1
36 43.13 wind 9.0 1440 < th dose independent rect. 7 1
37 43.13 temperature 10.0 30 > th dose independent rect. 6 1
40 43.13 temperature 10.0 1440 > th dose independent rect. 7 1
44 43.13 temperature 30.0 30 < th dose independent rect. 6 1
45 43.13 temperature 30.0 1440 < th dose independent rect. 7 1
49 43.13 humidity 50.0 30 > th dose independent rect. 6 1
52 43.13 humidity 50.0 1440 > th dose independent rect. 7 1
58 43.13 atmosphere 995.0 30 > th dose independent rect. 6 1
59 43.13 atmosphere 995.0 1440 > th dose independent rect. 7 1
60 43.13 atmosphere 1015.0 30 < th dose independent rect. 6 1
61 43.13 atmosphere 1015.0 1440 < th dose independent rect. 7 1
62 43.13 radiation 20.0 30 < th dose independent rect. 6 1
65 43.13 precipitation 0.1 30 < th dose independent rect. 6 1
66 43.13 temperature 10.0 30 > th dose independent rect. 7 23
67 43.13 temperature 10.0 1440 > th dose independent rect. 8 23
70 43.13 precipitation 0.1 30 < th dose dependent rect. 6 1
73 43.17 radiation 1.0 30 > th dose independent rect. 6 1
79 43.19 temperature 20.0 30 > th dose dependent rect. 2 1
80 43.19 temperature 10.0 30 > th dose dependent rect. 6 1
83 43.21 radiation 40.0 30 < th dose dependent rect. 6 1
84 43.22 temperature 20.0 30 > th dose independent rect. 2 1
86 43.23 atmosphere 1005.0 90 > th dose independent rect. 2 1
91 43.24 wind 9.0 1440 < th dose independent rect. 3 1
92 43.24 temperature 10.0 1440 > th dose independent rect. 3 1
96 43.24 temperature 30.0 1440 < th dose independent rect. 3 1
100 43.24 humidity 50.0 1440 > th dose independent rect. 3 1
110 43.24 atmosphere 995.0 1440 > th dose independent rect. 3 1
111 43.24 radiation 1.0 1440 < th dose independent rect. 3 1
131 43.24 temperature 10.0 1440 > th dose independent rect. 4 23
136 43.24 radiation 1.0 1440 < th dose dependent rect. 3 1
151 43.26 wind 3.0 30 < th dose dependent rect. 2 1
155 43.27 wind 3.0 30 < th dose independent rect. 2 1
161 43.28 humidity 80.0 30 > th dose independent rect. 2 1
167 43.30 temperature 10.0 30 > th dose independent rect. 2 1
169 43.30 temperature 30.0 30 < th dose independent rect. 2 1
170 43.30 humidity 50.0 30 > th dose independent rect. 2 1
175 43.30 atmosphere 1010.0 30 < th dose independent rect. 2 1
177 43.30 radiation 1.0 30 < th dose independent rect. 2 1
182 43.30 precipitation 0.1 30 < th dose independent rect. 2 1
183 43.30 temperature 10.0 30 > th dose independent rect. 3 23
186 43.30 humidity 50.0 30 > th dose dependent rect. 2 1
190 43.30 radiation 1.0 30 < th dose dependent rect. 2 1
195 43.30 precipitation 0.1 30 < th dose dependent rect. 2 1
221 43.37 humidity 90.0 90 < th dose independent rect. 2 1
223 43.37 humidity 90.0 10 < th dose dependent rect. 6 1
225 43.38 atmosphere 1015.0 30 < th dose dependent rect. 2 1
283 43.44 wind 1.0 30 > th dose independent rect. 2 1
284 43.44 temperature 30.0 30 < th dose dependent rect. 2 1
296 43.50 atmosphere 1000.0 30 > th dose independent rect. 3 23
299 43.51 atmosphere 1015.0 30 < th dose dependent rect. 6 1
317 43.59 precipitation 0.1 30 < th dose independent rect. 3 23
319 43.59 precipitation 0.1 30 < th dose dependent rect. 3 23
327 43.66 wind 9.0 30 < th dose independent rect. 7 23
330 43.67 atmosphere 995.0 720 > th dose independent rect. 15 16
331 43.67 precipitation 0.1 720 < th dose independent rect. 15 16
336 43.67 precipitation 0.1 720 < th dose dependent rect. 15 16
353 43.69 atmosphere 995.0 720 > th dose independent rect. 7 8
361 43.69 humidity 90.0 90 < th dose dependent rect. 2 5
368 43.74 wind 9.0 720 < th dose independent rect. 19 8
372 43.75 temperature 10.0 720 > th dose independent rect. 7 8
373 43.75 atmosphere 1015.0 720 < th dose independent rect. 7 8
374 43.75 temperature 10.0 720 > th dose independent rect. 15 16
375 43.75 atmosphere 995.0 720 > th dose independent rect. 3 16
376 43.75 wind 1.0 10 > th dose independent rect. 8 22
377 43.76 wind 1.0 30 > th dose dependent rect. 6 1
382 43.77 precipitation 0.1 720 < th dose independent rect. 19 8
383 43.77 precipitation 0.1 720 < th dose dependent rect. 19 8
389 43.81 temperature 10.0 720 > th dose independent rect. 19 8
390 43.81 temperature 30.0 720 < th dose independent rect. 19 8
391 43.81 humidity 50.0 720 > th dose independent rect. 19 8
392 43.81 atmosphere 995.0 720 > th dose independent rect. 19 8
393 43.81 radiation 1.0 720 < th dose independent rect. 19 8
398 43.81 temperature 10.0 720 > th dose independent rect. 3 16
399 43.81 radiation 1.0 720 < th dose dependent rect. 19 8
409 43.85 radiation 1.0 720 < th dose independent rect. 21 8
415 43.86 radiation 10.0 720 < th dose dependent rect. 21 8
416 43.87 wind 9.0 30 < th dose independent rect. 3 23
419 43.88 precipitation 0.1 720 < th dose independent rect. 5 16
423 43.88 precipitation 0.1 720 < th dose dependent rect. 5 16
426 43.89 atmosphere 995.0 720 > th dose independent rect. 17 16
429 43.90 temperature 10.0 720 > th dose independent rect. 21 8
430 43.90 temperature 30.0 720 < th dose independent rect. 21 8
431 43.90 humidity 50.0 720 > th dose independent rect. 21 8
434 43.90 atmosphere 995.0 720 > th dose independent rect. 21 8
438 43.90 temperature 10.0 720 > th dose independent rect. 5 16
439 43.90 atmosphere 995.0 720 > th dose independent rect. 5 16
458 43.92 wind 1.0 10 > th dose independent rect. 21 23
469 43.93 humidity 80.0 1440 > th dose independent rect. 24 3
472 43.95 temperature 10.0 720 > th dose independent rect. 9 8
473 43.95 atmosphere 995.0 720 > th dose independent rect. 9 8
474 43.95 atmosphere 1015.0 720 < th dose independent rect. 9 8
475 43.95 temperature 10.0 720 > th dose independent rect. 17 16
479 43.96 humidity 80.0 720 < th dose independent rect. 2 3
481 43.96 humidity 80.0 720 < th dose dependent rect. 2 3
485 43.97 humidity 80.0 720 < th dose independent rect. 2 1
498 43.97 precipitation 0.1 720 < th dose independent rect. 9 8
499 43.97 humidity 80.0 720 < th dose dependent rect. 2 1
505 43.97 precipitation 0.1 720 < th dose dependent rect. 9 8
546 44.01 precipitation 0.1 720 < th dose independent rect. 7 8
551 44.01 precipitation 0.1 720 < th dose dependent rect. 7 8
574 44.08 humidity 70.0 720 > th dose independent rect. 3 6
577 44.10 wind 9.0 720 < th dose independent rect. 21 8
580 44.11 atmosphere 1005.0 10 > th dose independent rect. 2 6
586 44.12 wind 1.0 10 > th dose independent rect. 21 9
597 44.17 humidity 50.0 30 > th dose independent rect. 3 23
598 44.17 precipitation 0.1 30 < th dose independent rect. 7 23
600 44.17 precipitation 0.1 30 < th dose dependent rect. 7 23
603 44.18 humidity 90.0 90 < th dose independent rect. 1 20
607 44.19 radiation 10.0 43200 < th dose dependent rect. 22 5
608 44.19 wind 7.0 30 < th dose dependent rect. 2 6
625 44.22 atmosphere 1000.0 30 > th dose independent rect. 8 18
630 44.23 wind 5.0 30 < th dose independent rect. 2 6
631 44.23 wind 1.0 10 > th dose independent rect. 8 18
633 44.23 temperature 10.0 30 > th dose dependent rect. 23 3
643 44.27 wind 9.0 4320 < th dose independent rect. 3 6
651 44.29 temperature 10.0 43200 > th dose independent rect. 9 1
652 44.30 atmosphere 1015.0 720 < th dose independent rect. 5 16
668 44.33 precipitation 0.1 720 < th dose independent rect. 21 8
670 44.33 precipitation 0.1 720 < th dose dependent rect. 21 8
672 44.34 wind 1.0 10 > th dose independent rect. 23 7
673 44.34 wind 1.0 720 > th dose independent rect. 9 8
676 44.34 wind 1.0 10 < th dose independent rect. 6 21
684 44.35 precipitation 0.1 30 < th dose independent rect. 2 6
692 44.35 precipitation 0.1 30 < th dose dependent rect. 2 6
706 44.37 radiation 30.0 1440 < th dose independent rect. 24 7
708 44.37 precipitation 0.1 30 < th dose independent rect. 2 19
714 44.37 precipitation 0.1 30 < th dose dependent rect. 2 19
717 44.38 temperature 10.0 1440 > th dose independent rect. 22 5
720 44.38 temperature 30.0 1440 < th dose independent rect. 22 5
724 44.38 humidity 50.0 1440 > th dose independent rect. 22 5
732 44.38 atmosphere 995.0 1440 > th dose independent rect. 22 5
733 44.38 radiation 1.0 1440 < th dose independent rect. 22 5
755 44.38 temperature 10.0 30 > th dose independent rect. 2 6
757 44.38 temperature 10.0 1440 > th dose independent rect. 3 6
760 44.38 temperature 30.0 30 < th dose independent rect. 2 6
761 44.38 humidity 50.0 30 > th dose independent rect. 2 6
763 44.38 humidity 50.0 1440 > th dose independent rect. 3 6
765 44.38 atmosphere 995.0 30 > th dose independent rect. 2 6
766 44.38 atmosphere 995.0 1440 > th dose independent rect. 3 6
767 44.38 atmosphere 1015.0 30 < th dose independent rect. 2 6
769 44.38 temperature 10.0 30 > th dose independent rect. 8 18
770 44.38 temperature 10.0 1440 > th dose independent rect. 9 18
773 44.38 temperature 10.0 1440 > th dose independent rect. 3 19
785 44.39 atmosphere 1000.0 30 > th dose independent rect. 21 5
794 44.39 atmosphere 995.0 720 > th dose independent rect. 23 16
796 44.39 precipitation 0.1 10 < th dose independent rect. 8 18
800 44.39 precipitation 0.1 10 < th dose dependent rect. 8 18
811 44.40 temperature 10.0 30 > th dose dependent rect. 21 5
820 44.41 temperature 10.0 30 > th dose independent rect. 21 5
821 44.41 temperature 30.0 30 < th dose independent rect. 21 5
822 44.41 humidity 50.0 30 > th dose independent rect. 21 5
826 44.41 radiation 1.0 30 < th dose independent rect. 21 5
832 44.41 temperature 10.0 30 > th dose independent rect. 2 19
834 44.41 atmosphere 1015.0 30 < th dose independent rect. 2 19
838 44.41 radiation 1.0 30 < th dose dependent rect. 21 5
845 44.42 wind 9.0 30 < th dose independent rect. 21 5
846 44.42 precipitation 0.1 30 < th dose independent rect. 21 5
848 44.42 wind 9.0 30 < th dose independent rect. 2 19
851 44.42 precipitation 0.1 30 < th dose dependent rect. 21 5
852 44.42 wind 3.0 30 < th dose dependent rect. 2 8
856 44.43 wind 9.0 30 < th dose independent rect. 8 18
859 44.43 radiation 10.0 43200 < th dose dependent rect. 24 3
861 44.44 temperature 25.0 10 > th dose independent rect. 23 7
862 44.44 temperature 25.0 10 < th dose independent rect. 2 8
864 44.44 humidity 70.0 720 > th dose independent rect. 21 12
866 44.44 atmosphere 995.0 30 > th dose independent rect. 7 23
874 44.45 precipitation 0.1 720 < th dose independent rect. 15 8
881 44.45 precipitation 0.1 720 < th dose dependent rect. 15 8
897 44.47 radiation 40.0 30 < th dose independent rect. 2 6
899 44.47 radiation 10.0 30 < th dose independent rect. 21 9
901 44.47 humidity 50.0 30 > th dose independent rect. 8 18
907 44.48 temperature 10.0 720 > th dose independent rect. 15 8
908 44.48 temperature 10.0 720 > th dose independent rect. 23 16
909 44.48 humidity 50.0 720 > th dose independent rect. 17 16
929 44.49 atmosphere 995.0 30 > th dose independent rect. 2 19
931 44.49 precipitation 0.1 90 < th dose independent rect. 1 22
944 44.49 precipitation 0.1 90 < th dose dependent rect. 1 22
948 44.50 wind 9.0 720 < th dose independent rect. 15 16
949 44.50 humidity 50.0 30 > th dose independent rect. 2 19
950 44.50 precipitation 0.1 270 < th dose independent rect. 22 23
956 44.50 temperature 30.0 10 < th dose dependent rect. 2 8
958 44.50 precipitation 0.1 270 < th dose dependent rect. 22 23
959 44.51 atmosphere 1000.0 30 > th dose independent rect. 23 3
969 44.52 temperature 15.0 90 > th dose independent rect. 23 2
983 44.53 atmosphere 995.0 720 > th dose independent rect. 15 8
990 44.53 temperature 10.0 30 > th dose dependent rect. 2 6
997 44.54 humidity 50.0 720 > th dose independent rect. 7 8
1000 44.54 wind 1.0 10 > th dose independent rect. 23 16