Os09g0310800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0310800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.36 | 0.33 | 7.43 | 0.457 | 0.244 | -0.616 | 0.347 | -1.09 | 0.351 | 1.42 | 22.24 | 1980 | -- | -- |
| 53.08 | 0.339 | 7.45 | 0.248 | 0.245 | -0.53 | 0.481 | -- | 0.293 | 1.39 | 23.3 | 2069 | -- | -- |
| 49.77 | 0.329 | 7.43 | 0.441 | 0.232 | -0.624 | -- | -1.11 | 0.347 | 1.64 | 22.3 | 2096 | -- | -- |
| 52.66 | 0.338 | 7.48 | 0.0893 | 0.219 | -0.569 | -- | -- | 0.221 | 1.94 | 23.31 | 2204 | -- | -- |
| 52.72 | 0.338 | 7.43 | 0.464 | -- | -0.627 | -- | -1.11 | 0.344 | -- | 22.4 | 2280 | -- | -- |
| 65.65 | 0.38 | 7.42 | 0.331 | 0.265 | -- | 0.365 | -- | 0.472 | 0.981 | -- | -- | -- | -- |
| 66.19 | 0.381 | 7.42 | 0.318 | 0.266 | -- | -- | -- | 0.47 | 1.23 | -- | -- | -- | -- |
| 54.02 | 0.342 | 7.47 | 0.103 | -- | -0.735 | -- | -- | 0.222 | -- | 24.41 | 2461 | -- | -- |
| 52.75 | 0.338 | 7.48 | -- | 0.21 | -0.601 | -- | -- | 0.196 | 1.87 | 23.34 | 2203 | -- | -- |
| 70.56 | 0.393 | 7.42 | 0.328 | -- | -- | -- | -- | 0.475 | -- | -- | -- | -- | -- |
| 68.85 | 0.388 | 7.43 | -- | 0.271 | -- | -- | -- | 0.435 | 1.27 | -- | -- | -- | -- |
| 53.96 | 0.342 | 7.48 | -- | -- | -0.752 | -- | -- | 0.22 | -- | 24.5 | 2477 | -- | -- |
| 73.4 | 0.4 | 7.43 | -- | -- | -- | -- | -- | 0.439 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 50.00 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 22 |
| 8 | 50.33 | temperature | 25 | 90 | < th | dose dependent | rect. | 20 | 23 |
| 23 | 50.64 | temperature | 25 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 29 | 50.72 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 21 |
| 42 | 50.77 | temperature | 25 | 10 | < th | dose dependent | rect. | 8 | 23 |
| 47 | 50.82 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 54 | 50.85 | temperature | 25 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 61 | 50.91 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 63 | 50.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 77 | 51.02 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 79 | 51.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 86 | 51.04 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 88 | 51.05 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 90 | 51.05 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 92 | 51.05 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 98 | 51.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 104 | 51.10 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 17 |
| 121 | 51.21 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 152 | 51.38 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 163 | 51.42 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 168 | 51.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 173 | 51.45 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 3 |
| 177 | 51.46 | temperature | 30 | 270 | < th | dose dependent | sin | 11 | NA |
| 180 | 51.48 | temperature | 25 | 720 | < th | dose dependent | sin | 18 | NA |
| 188 | 51.49 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 220 | 51.58 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 229 | 51.59 | temperature | 10 | 270 | > th | dose dependent | sin | 11 | NA |
| 262 | 51.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 21 |
| 273 | 51.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 275 | 51.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 14 | 22 |
| 323 | 51.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 336 | 51.74 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 359 | 51.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 368 | 51.76 | temperature | 25 | 1440 | < th | dose dependent | rect. | 18 | 23 |
| 513 | 51.89 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 18 |
| 617 | 51.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 635 | 52.00 | temperature | 30 | 10 | < th | dose dependent | sin | 9 | NA |
| 672 | 52.03 | temperature | 25 | 1440 | < th | dose dependent | sin | 3 | NA |
| 780 | 52.12 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 803 | 52.14 | temperature | 10 | 10 | > th | dose dependent | sin | 9 | NA |
| 822 | 52.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 838 | 52.16 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 911 | 52.22 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 10 |