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Os09g0308900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Acid phosphatase/vanadium-dependent haloperoxidase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0193) R2 : 0.796
β1 : -- (--) R2dD : -- R2D : --
β2 : 2.11 (0.0506) R2dC : 0.781 R2C : 0.763
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.306 (0.0406) R2dN8 : 0.0329 R2N8 : 0.0153
σ : 0.364
deviance : 60.5
__
_____
C
peak time of C : 17.9
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
44.4 0.313 11.6 0.409 2.18 0.673 0.807 0.629 0.438 17.9 50.98 3307 -- --
44.85 0.312 11.6 0.458 2.18 0.724 0.708 -- 0.454 17.9 51.09 3327 -- --
45.85 0.315 11.6 0.427 2.19 0.702 -- 0.359 0.447 17.9 50.91 3286 -- --
46.01 0.316 11.6 0.463 2.19 0.723 -- -- 0.452 17.9 50.33 3310 -- --
248.43 0.738 11.5 0.435 -- -0.994 -- 0.156 0.3 -- 51.91 8504 -- --
53.23 0.342 11.6 0.482 2.11 -- 0.729 -- 0.356 17.9 -- -- -- --
54.5 0.346 11.6 0.477 2.12 -- -- -- 0.359 17.9 -- -- -- --
245.92 0.734 11.5 0.443 -- -0.875 -- -- 0.273 -- 62.31 8499 -- --
51.39 0.334 11.6 -- 2.19 0.772 -- -- 0.437 17.9 59.76 3316 -- --
286.57 0.791 11.5 0.413 -- -- -- -- 0.31 -- -- -- -- --
60.5 0.364 11.6 -- 2.11 -- -- -- 0.306 17.9 -- -- -- --
251.09 0.74 11.6 -- -- -0.867 -- -- 0.224 -- 62.31 8499 -- --
291.06 0.796 11.6 -- -- -- -- -- 0.264 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 40.26 temperature 10.0 720 > th dose dependent rect. 19 2
3 41.17 temperature 20.0 90 > th dose dependent rect. 4 3
4 41.44 precipitation 0.1 270 < th dose independent rect. 17 13
5 41.44 precipitation 0.1 270 < th dose dependent rect. 17 13
6 41.61 atmosphere 995.0 270 > th dose independent rect. 6 11
9 41.67 precipitation 0.1 720 < th dose independent rect. 9 22
11 41.67 precipitation 0.1 720 < th dose dependent rect. 9 22
12 41.83 temperature 10.0 30 > th dose dependent rect. 4 19
13 41.86 temperature 10.0 270 > th dose independent rect. 6 11
14 41.86 atmosphere 1015.0 270 < th dose independent rect. 6 11
15 41.86 temperature 10.0 270 > th dose independent rect. 17 13
16 41.86 radiation 20.0 270 < th dose independent rect. 17 13
20 41.86 temperature 10.0 90 > th dose dependent rect. 19 12
21 41.93 temperature 25.0 720 > th dose dependent rect. 20 1
22 41.95 wind 9.0 270 < th dose independent rect. 6 11
23 41.96 precipitation 0.1 720 < th dose independent rect. 19 10
24 41.96 precipitation 0.1 720 < th dose dependent rect. 19 10
25 41.98 wind 3.0 90 < th dose dependent rect. 4 3
27 42.01 humidity 50.0 270 > th dose independent rect. 17 13
29 42.04 wind 9.0 270 < th dose independent rect. 17 13
30 42.14 temperature 15.0 90 > th dose independent rect. 19 12
33 42.20 precipitation 0.1 270 < th dose independent rect. 6 11
34 42.20 precipitation 0.1 270 < th dose dependent rect. 6 11
35 42.20 radiation 30.0 270 < th dose dependent rect. 16 14
38 42.25 radiation 20.0 270 < th dose independent rect. 15 15
49 42.42 precipitation 0.1 720 < th dose independent rect. 1 6
50 42.42 precipitation 0.1 720 < th dose dependent rect. 1 6
53 42.46 humidity 90.0 720 < th dose independent rect. 19 3
54 42.49 temperature 15.0 720 > th dose independent rect. 19 2
57 42.51 humidity 50.0 30 > th dose dependent rect. 7 21
59 42.55 precipitation 0.1 720 < th dose independent rect. 19 18
61 42.55 precipitation 0.1 720 < th dose dependent rect. 19 18
63 42.58 wind 3.0 90 < th dose independent rect. 4 3
68 42.66 temperature 30.0 720 < th dose independent rect. 7 2
69 42.68 humidity 60.0 30 > th dose dependent rect. 23 5
70 42.68 wind 9.0 90 < th dose dependent rect. 19 12
71 42.68 atmosphere 995.0 90 > th dose dependent rect. 7 12
72 42.70 wind 7.0 720 < th dose independent rect. 19 2
77 42.77 wind 1.0 270 > th dose independent rect. 6 11
79 42.78 temperature 20.0 270 > th dose dependent rect. 2 4
80 42.80 precipitation 0.1 90 < th dose independent rect. 19 12
83 42.80 precipitation 0.1 90 < th dose dependent rect. 19 12
84 42.81 wind 9.0 270 < th dose dependent rect. 2 13
87 42.83 radiation 30.0 720 < th dose independent rect. 7 2
88 42.83 atmosphere 1015.0 30 < th dose dependent rect. 4 19
89 42.84 wind 9.0 720 < th dose dependent rect. 2 5
92 42.85 precipitation 0.1 720 < th dose independent rect. 19 2
95 42.85 precipitation 0.1 720 < th dose dependent rect. 19 2
100 42.88 atmosphere 995.0 270 > th dose independent rect. 17 13
102 42.89 radiation 40.0 90 < th dose dependent rect. 7 21
108 42.96 temperature 15.0 270 > th dose independent rect. 24 23
109 42.96 temperature 25.0 720 > th dose dependent rect. 19 12
116 43.01 wind 7.0 720 < th dose dependent rect. 3 2
122 43.03 temperature 30.0 90 < th dose independent rect. 19 12
123 43.03 humidity 50.0 90 > th dose independent rect. 19 12
125 43.03 atmosphere 995.0 90 > th dose independent rect. 19 12
127 43.03 radiation 40.0 90 < th dose independent rect. 19 12
129 43.03 wind 5.0 270 < th dose dependent rect. 2 4
130 43.04 wind 9.0 90 < th dose independent rect. 19 12
136 43.10 temperature 25.0 720 > th dose independent rect. 19 3
137 43.12 temperature 25.0 720 > th dose dependent rect. 19 6
138 43.13 temperature 25.0 720 > th dose independent rect. 20 1
142 43.15 atmosphere 995.0 720 > th dose dependent rect. 7 1
153 43.21 temperature 20.0 90 > th dose independent rect. 4 3
154 43.21 wind 3.0 10 < th dose independent rect. 4 4
173 43.28 temperature 10.0 30 > th dose independent rect. 23 5
174 43.28 temperature 30.0 30 < th dose independent rect. 23 5
175 43.28 humidity 50.0 30 > th dose independent rect. 23 5
178 43.28 atmosphere 995.0 30 > th dose independent rect. 23 5
179 43.28 radiation 1.0 30 < th dose independent rect. 23 5
184 43.28 temperature 10.0 30 > th dose independent rect. 4 19
186 43.28 atmosphere 1015.0 30 < th dose independent rect. 4 19
187 43.28 radiation 1.0 30 < th dose dependent rect. 23 5
194 43.29 wind 9.0 30 < th dose independent rect. 23 5
196 43.30 wind 3.0 270 < th dose independent rect. 2 4
203 43.31 humidity 60.0 720 > th dose independent rect. 19 2
212 43.35 wind 9.0 30 < th dose independent rect. 4 19
213 43.35 humidity 60.0 270 > th dose dependent rect. 23 1
214 43.35 humidity 90.0 720 < th dose dependent rect. 19 2
227 43.40 temperature 30.0 720 < th dose independent rect. 19 2
229 43.40 atmosphere 995.0 720 > th dose independent rect. 19 2
230 43.40 radiation 1.0 720 < th dose independent rect. 19 2
236 43.40 temperature 10.0 720 > th dose independent rect. 21 22
237 43.40 radiation 1.0 720 < th dose dependent rect. 19 2
245 43.41 humidity 50.0 720 > th dose dependent rect. 7 2
259 43.45 wind 7.0 720 < th dose independent rect. 7 2
265 43.47 temperature 10.0 720 > th dose independent rect. 7 2
267 43.47 humidity 50.0 720 > th dose independent rect. 7 2
268 43.47 atmosphere 995.0 720 > th dose independent rect. 7 2
269 43.47 atmosphere 1015.0 720 < th dose independent rect. 7 2
270 43.47 temperature 10.0 720 > th dose independent rect. 9 22
282 43.51 precipitation 0.1 30 < th dose independent rect. 4 19
284 43.51 humidity 60.0 270 > th dose dependent rect. 21 4
288 43.51 precipitation 0.1 30 < th dose dependent rect. 4 19
338 43.56 precipitation 0.1 270 < th dose independent rect. 1 21
340 43.56 precipitation 0.1 270 < th dose dependent rect. 1 21
342 43.57 wind 1.0 720 > th dose independent rect. 19 2
351 43.58 wind 3.0 90 < th dose dependent rect. 4 17
352 43.58 wind 9.0 270 < th dose dependent rect. 1 20
355 43.59 wind 9.0 270 < th dose dependent rect. 2 18
366 43.63 radiation 1.0 30 < th dose independent sin 11 NA
368 43.63 wind 3.0 90 < th dose dependent rect. 4 9
372 43.64 radiation 1.0 30 < th dose independent rect. 23 15
376 43.66 wind 1.0 720 > th dose independent rect. 7 2
381 43.67 temperature 15.0 270 > th dose independent rect. 1 21
383 43.68 radiation 1.0 30 < th dose independent rect. 23 13
384 43.68 precipitation 0.1 270 < th dose independent rect. 2 13
391 43.68 precipitation 0.1 270 < th dose dependent rect. 2 13
393 43.69 precipitation 0.1 720 < th dose independent rect. 7 2
408 43.69 radiation 1.0 30 < th dose independent rect. 23 9
415 43.69 precipitation 0.1 720 < th dose dependent rect. 7 2
426 43.70 wind 3.0 90 < th dose dependent rect. 4 11
428 43.71 radiation 1.0 90 > th dose independent rect. 4 2
448 43.72 wind 9.0 90 < th dose dependent rect. 4 18
458 43.74 atmosphere 995.0 90 > th dose independent rect. 7 21
471 43.77 wind 3.0 90 < th dose dependent rect. 4 13
488 43.80 humidity 50.0 270 > th dose dependent rect. 6 9
491 43.81 atmosphere 1015.0 720 < th dose independent rect. 19 2
506 43.84 precipitation 0.1 30 < th dose independent rect. 23 5
510 43.84 precipitation 0.1 30 < th dose dependent rect. 23 5
514 43.85 wind 9.0 720 < th dose independent rect. 19 10
527 43.87 temperature 30.0 10 < th dose dependent rect. 23 13
552 43.91 temperature 30.0 30 < th dose dependent rect. 23 5
556 43.92 humidity 50.0 270 > th dose independent rect. 6 10
592 43.96 precipitation 0.1 90 < th dose independent rect. 4 3
594 43.96 precipitation 0.1 90 < th dose dependent rect. 4 3
601 43.98 wind 3.0 270 < th dose independent rect. 1 8
612 44.00 wind 5.0 270 < th dose dependent rect. 1 8
632 44.05 radiation 40.0 90 < th dose independent rect. 7 21
641 44.06 wind 9.0 90 < th dose dependent rect. 4 13
643 44.07 temperature 10.0 90 > th dose independent rect. 4 3
645 44.07 temperature 30.0 90 < th dose independent rect. 4 3
646 44.07 humidity 50.0 90 > th dose independent rect. 4 3
648 44.07 atmosphere 995.0 90 > th dose independent rect. 4 3
649 44.07 atmosphere 1015.0 90 < th dose independent rect. 4 3
650 44.07 radiation 40.0 90 < th dose independent rect. 4 3
654 44.07 temperature 10.0 90 > th dose independent rect. 7 21
657 44.08 wind 9.0 270 < th dose independent rect. 23 1
658 44.08 temperature 10.0 270 > th dose independent rect. 23 1
659 44.08 temperature 30.0 270 < th dose independent rect. 23 1
660 44.08 humidity 50.0 270 > th dose independent rect. 23 1
663 44.08 atmosphere 995.0 270 > th dose independent rect. 23 1
664 44.08 radiation 1.0 270 < th dose independent rect. 23 1
672 44.08 radiation 1.0 270 < th dose dependent rect. 23 1
703 44.12 radiation 30.0 720 < th dose independent rect. 22 11
706 44.12 radiation 1.0 10 > th dose dependent rect. 18 13
708 44.13 precipitation 0.1 270 < th dose independent rect. 23 1
711 44.13 humidity 60.0 720 > th dose independent rect. 19 10
712 44.13 precipitation 0.1 720 < th dose independent rect. 3 10
714 44.13 precipitation 0.1 270 < th dose dependent rect. 23 1
716 44.13 radiation 1.0 10 > th dose dependent rect. 5 2
728 44.13 precipitation 0.1 720 < th dose dependent rect. 3 10
736 44.14 radiation 40.0 720 < th dose dependent rect. 7 1
756 44.17 humidity 50.0 90 > th dose independent rect. 7 12
757 44.17 precipitation 0.1 270 < th dose independent rect. 24 23
762 44.17 radiation 1.0 30 < th dose dependent rect. 22 21
763 44.17 precipitation 0.1 270 < th dose dependent rect. 24 23
779 44.19 atmosphere 995.0 30 > th dose dependent rect. 7 21
781 44.20 precipitation 0.1 720 < th dose independent rect. 3 2
783 44.20 precipitation 0.1 720 < th dose dependent rect. 3 2
791 44.21 precipitation 0.1 720 < th dose independent rect. 4 17
794 44.21 precipitation 0.1 720 < th dose dependent rect. 4 17
799 44.22 atmosphere 995.0 30 > th dose dependent rect. 23 5
811 44.24 temperature 10.0 720 > th dose independent rect. 19 10
812 44.24 temperature 30.0 720 < th dose independent rect. 19 10
813 44.24 temperature 30.0 720 < th dose independent rect. 23 10
815 44.24 atmosphere 995.0 720 > th dose independent rect. 19 10
816 44.24 radiation 20.0 720 < th dose independent rect. 19 10
820 44.24 temperature 10.0 720 > th dose independent rect. 5 14
821 44.24 atmosphere 1015.0 720 < th dose independent rect. 5 14
824 44.24 radiation 30.0 720 < th dose dependent rect. 19 10
830 44.25 radiation 1.0 720 < th dose independent rect. 19 10
834 44.26 wind 9.0 270 < th dose independent rect. 22 3
835 44.26 temperature 10.0 270 > th dose independent rect. 22 3
836 44.26 temperature 30.0 270 < th dose independent rect. 22 3
837 44.26 humidity 50.0 270 > th dose independent rect. 22 3
840 44.26 atmosphere 995.0 270 > th dose independent rect. 22 3
841 44.26 radiation 1.0 270 < th dose independent rect. 22 3
847 44.26 wind 9.0 90 < th dose independent rect. 7 21
849 44.26 radiation 1.0 270 < th dose dependent rect. 22 3
890 44.30 humidity 60.0 14400 > th dose independent rect. 12 1
892 44.30 precipitation 0.1 270 < th dose independent rect. 22 3
895 44.30 atmosphere 1015.0 270 < th dose independent rect. 1 20
896 44.30 precipitation 0.1 270 < th dose dependent rect. 22 3
905 44.31 wind 9.0 30 < th dose dependent rect. 23 5
957 44.34 humidity 50.0 90 > th dose dependent rect. 4 3
986 44.37 temperature 10.0 270 > th dose dependent rect. 17 13