Os09g0304500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os09g0304500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 532.77 | 1.08 | 5.14 | -3.66 | 3.28 | -6.36 | -2.02 | 6.24 | -0.108 | 21.5 | 30.1 | 701 | 12.2 | -- |
| 553.39 | 1.1 | 5.08 | -3.05 | 3.26 | -6.51 | -0.94 | -- | -0.0151 | 21 | 28.5 | 666 | 12.9 | -- |
| 542.1 | 1.08 | 5.12 | -3.45 | 3.11 | -6.2 | -- | 4.72 | -0.044 | 21.5 | 29.84 | 725 | 12.1 | -- |
| 549.94 | 1.09 | 5.06 | -2.84 | 3.31 | -6.43 | -- | -- | 0.0404 | 21.1 | 27.88 | 555 | 12.1 | -- |
| 664.55 | 1.2 | 5.1 | -3.88 | -- | -5.71 | -- | 5.66 | -0.239 | -- | 50.35 | 1188 | 9.38 | -- |
| 847.34 | 1.36 | 4.89 | -1.92 | 2.71 | -- | -0.431 | -- | 0.742 | 19.6 | -- | -- | -- | -- |
| 847.82 | 1.36 | 4.89 | -1.91 | 2.71 | -- | -- | -- | 0.74 | 19.7 | -- | -- | -- | -- |
| 647.7 | 1.19 | 4.95 | -2.79 | -- | -5.2 | -- | -- | 0.0871 | -- | 120.5 | 1353 | 9.92 | -- |
| 744.4 | 1.27 | 4.98 | -- | 3.22 | -5.08 | -- | -- | 0.419 | 20.8 | 26.1 | 370 | 11 | -- |
| 1242.79 | 1.65 | 4.82 | -1.95 | -- | -- | -- | -- | 0.7 | -- | -- | -- | -- | -- |
| 944.31 | 1.44 | 4.84 | -- | 2.73 | -- | -- | -- | 0.954 | 19.6 | -- | -- | -- | -- |
| 848.84 | 1.36 | 4.83 | -- | -- | -4.42 | -- | -- | 0.628 | -- | 146.9 | 1342 | 9.88 | -- |
| 1343.11 | 1.71 | 4.77 | -- | -- | -- | -- | -- | 0.917 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 531.49 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 6 |
| 2 | 533.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 5 | 534.02 | temperature | 30 | 720 | < th | dose dependent | sin | 18 | NA |
| 6 | 534.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 11 | 536.00 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 9 |
| 50 | 544.69 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 63 | 546.62 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 78 | 548.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 14 |
| 82 | 548.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 107 | 551.12 | temperature | 25 | 10 | < th | dose dependent | sin | 15 | NA |
| 118 | 552.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 18 |
| 123 | 552.88 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 4 |
| 144 | 555.25 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 5 |
| 145 | 555.36 | temperature | 15 | 90 | > th | dose dependent | sin | 14 | NA |
| 165 | 557.32 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 168 | 557.49 | temperature | 25 | 720 | < th | dose independent | rect. | 9 | 15 |
| 178 | 557.99 | temperature | 25 | 720 | < th | dose independent | sin | 19 | NA |
| 202 | 559.53 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 19 |
| 207 | 559.80 | wind | 5 | 43200 | > th | dose independent | rect. | 12 | 19 |
| 256 | 562.04 | wind | 5 | 43200 | < th | dose independent | rect. | 4 | 16 |
| 274 | 562.56 | wind | 5 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 290 | 562.87 | wind | 5 | 43200 | < th | dose independent | sin | 22 | NA |
| 291 | 562.92 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 16 |
| 302 | 563.13 | wind | 5 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 314 | 563.45 | temperature | 25 | 720 | > th | dose independent | sin | 19 | NA |
| 316 | 563.49 | wind | 5 | 43200 | > th | dose independent | sin | 21 | NA |
| 332 | 563.67 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 492 | 566.40 | wind | 3 | 43200 | > th | dose dependent | sin | 22 | NA |
| 499 | 566.44 | wind | 3 | 43200 | > th | dose dependent | rect. | 6 | 15 |
| 510 | 566.70 | wind | 3 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 546 | 567.14 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 560 | 567.26 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 610 | 567.79 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 621 | 567.98 | wind | 3 | 43200 | > th | dose dependent | rect. | 11 | 18 |
| 626 | 568.02 | wind | 3 | 43200 | > th | dose dependent | rect. | 8 | 9 |
| 647 | 568.31 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 689 | 568.66 | wind | 3 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 699 | 568.75 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 810 | 570.26 | wind | 9 | 43200 | < th | dose dependent | rect. | 8 | 9 |
| 813 | 570.27 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 814 | 570.27 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 977 | 572.56 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |