Os09g0300800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF247, plant family protein.
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Os09g0300800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF247, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.34 | 0.634 | 3.45 | -0.992 | 1.12 | 1.38 | -4.65 | -2.69 | -0.137 | 22.4 | 22.3 | 10167 | -- | -- |
| 184.17 | 0.632 | 3.51 | -0.748 | 1.12 | 2.39 | -4.68 | -- | -0.0993 | 22.1 | 20.62 | 11514 | -- | -- |
| 266.57 | 0.766 | 3.56 | -1.56 | 1 | 1.18 | -- | -4.61 | -0.412 | 21.9 | 22.3 | 10167 | -- | -- |
| 267.74 | 0.762 | 3.54 | -0.647 | 1.14 | 2.44 | -- | -- | -0.161 | 22.4 | 19.9 | 11635 | -- | -- |
| 323.44 | 0.842 | 3.52 | -1.51 | -- | 1.78 | -- | -4.03 | -0.365 | -- | 22.3 | 10167 | -- | -- |
| 247.86 | 0.738 | 3.67 | -2.5 | 1.11 | -- | -4.73 | -- | -0.7 | 22.3 | -- | -- | -- | -- |
| 337.49 | 0.86 | 3.66 | -2.31 | 1.13 | -- | -- | -- | -0.689 | 22.3 | -- | -- | -- | -- |
| 344.96 | 0.869 | 3.57 | -1.86 | -- | 2.43 | -- | -- | -0.421 | -- | 22.3 | 10167 | -- | -- |
| 272.76 | 0.769 | 3.52 | -- | 1.16 | 2.9 | -- | -- | -0.0178 | 22.5 | 20.25 | 11676 | -- | -- |
| 415.89 | 0.953 | 3.63 | -2.3 | -- | -- | -- | -- | -0.686 | -- | -- | -- | -- | -- |
| 478.65 | 1.02 | 3.6 | -- | 1.12 | -- | -- | -- | -0.431 | 22.1 | -- | -- | -- | -- |
| 349.09 | 0.87 | 3.48 | -- | -- | 2.82 | -- | -- | -0.0154 | -- | 19.91 | 13132 | -- | -- |
| 555.06 | 1.1 | 3.57 | -- | -- | -- | -- | -- | -0.431 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 172.52 | temperature | 30 | 90 | < th | dose dependent | sin | 16 | NA |
| 4 | 174.48 | temperature | 15 | 90 | > th | dose dependent | sin | 16 | NA |
| 49 | 180.18 | humidity | 70 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 51 | 180.32 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 52 | 180.33 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 54 | 180.43 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 62 | 180.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 14 |
| 66 | 180.75 | temperature | 30 | 720 | < th | dose dependent | rect. | 10 | 10 |
| 67 | 180.77 | temperature | 20 | 720 | > th | dose dependent | rect. | 9 | 14 |
| 79 | 181.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 6 |
| 94 | 181.15 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 13 |
| 101 | 181.20 | wind | 3 | 43200 | < th | dose dependent | rect. | 6 | 6 |
| 143 | 181.48 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 146 | 181.54 | wind | 3 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 151 | 181.55 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 3 |
| 158 | 181.61 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 179 | 181.75 | humidity | 80 | 43200 | > th | dose independent | rect. | 1 | 2 |
| 222 | 182.01 | humidity | 80 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 232 | 182.07 | wind | 3 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 282 | 182.27 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 319 | 182.42 | temperature | 20 | 720 | > th | dose dependent | sin | 20 | NA |
| 322 | 182.43 | temperature | 30 | 720 | < th | dose dependent | sin | 21 | NA |
| 323 | 182.44 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 15 |
| 329 | 182.46 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 338 | 182.50 | humidity | 80 | 43200 | < th | dose independent | sin | 11 | NA |
| 346 | 182.52 | humidity | 80 | 43200 | > th | dose independent | sin | 11 | NA |
| 357 | 182.57 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 385 | 182.65 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 395 | 182.67 | temperature | 20 | 14400 | < th | dose dependent | rect. | 20 | 7 |
| 405 | 182.69 | temperature | 20 | 14400 | < th | dose dependent | rect. | 21 | 13 |
| 413 | 182.71 | humidity | 80 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 433 | 182.74 | temperature | 20 | 14400 | < th | dose dependent | sin | 9 | NA |
| 485 | 182.80 | temperature | 20 | 14400 | < th | dose dependent | rect. | 1 | 9 |
| 511 | 182.83 | temperature | 10 | 720 | > th | dose dependent | rect. | 7 | 16 |
| 545 | 182.88 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 572 | 182.92 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 5 |
| 601 | 182.97 | temperature | 20 | 14400 | < th | dose independent | rect. | 17 | 5 |
| 653 | 183.05 | humidity | 60 | 43200 | < th | dose independent | rect. | 6 | 3 |
| 673 | 183.08 | wind | 3 | 43200 | > th | dose independent | sin | 2 | NA |
| 694 | 183.10 | temperature | 20 | 14400 | < th | dose independent | rect. | 16 | 7 |
| 727 | 183.15 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 19 |
| 780 | 183.21 | wind | 3 | 43200 | < th | dose independent | sin | 2 | NA |
| 781 | 183.21 | temperature | 20 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 793 | 183.22 | temperature | 20 | 14400 | > th | dose independent | rect. | 15 | 8 |
| 797 | 183.23 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 18 |
| 811 | 183.25 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 824 | 183.26 | wind | 5 | 43200 | < th | dose dependent | rect. | 4 | 20 |
| 876 | 183.32 | humidity | 60 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 913 | 183.37 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 995 | 183.47 | wind | 5 | 43200 | < th | dose dependent | rect. | 19 | 20 |
| 1000 | 183.48 | wind | 5 | 43200 | < th | dose dependent | sin | 2 | NA |