Os09g0296500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os09g0296500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 222.26 | 0.7 | 4.74 | -1.69 | 0.885 | 1.75 | -0.25 | -9.27 | -1.51 | 13.4 | 24.72 | 1293 | -- | -- |
| 246.79 | 0.732 | 4.47 | 0.603 | 0.946 | 1.46 | 0.146 | -- | -1.01 | 12.9 | -19.24 | 1002 | -- | -- |
| 221.88 | 0.694 | 4.73 | -1.52 | 0.887 | 1.64 | -- | -8.17 | -1.53 | 13.4 | 23.88 | 1292 | -- | -- |
| 246.85 | 0.732 | 4.46 | 0.616 | 0.944 | 1.57 | -- | -- | -1.01 | 12.4 | -1.036 | 856 | -- | -- |
| 258.64 | 0.753 | 4.54 | 0.154 | -- | 1.59 | -- | -4.65 | -1.13 | -- | 23.67 | 1603 | -- | -- |
| 278.82 | 0.783 | 4.42 | 1.02 | 0.732 | -- | 0.0623 | -- | -0.77 | 13.4 | -- | -- | -- | -- |
| 278.84 | 0.782 | 4.42 | 1.02 | 0.732 | -- | -- | -- | -0.769 | 13.4 | -- | -- | -- | -- |
| 261.74 | 0.757 | 4.48 | 0.653 | -- | 1.86 | -- | -- | -1.03 | -- | -3.761 | 1700 | -- | -- |
| 255.31 | 0.744 | 4.49 | -- | 0.993 | 1.78 | -- | -- | -1.12 | 12.6 | 9.007 | 937 | -- | -- |
| 311.78 | 0.825 | 4.43 | 0.992 | -- | -- | -- | -- | -0.785 | -- | -- | -- | -- | -- |
| 306.32 | 0.819 | 4.44 | -- | 0.714 | -- | -- | -- | -0.883 | 13.4 | -- | -- | -- | -- |
| 272.36 | 0.771 | 4.5 | -- | -- | 2.07 | -- | -- | -1.13 | -- | -3.761 | 1700 | -- | -- |
| 337.74 | 0.858 | 4.45 | -- | -- | -- | -- | -- | -0.895 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 222.08 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 3 | 222.19 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 5 | 222.32 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 18 |
| 7 | 222.46 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 11 |
| 18 | 222.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 14 |
| 19 | 222.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 21 |
| 23 | 222.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 8 |
| 62 | 223.34 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 8 |
| 143 | 224.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 19 |
| 156 | 224.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 169 | 224.77 | radiation | 1 | 14400 | < th | dose dependent | rect. | 20 | 9 |
| 179 | 224.80 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 185 | 224.84 | radiation | 1 | 14400 | < th | dose dependent | rect. | 1 | 4 |
| 199 | 224.92 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 202 | 224.95 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 206 | 224.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 23 |
| 207 | 224.98 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 230 | 225.23 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 276 | 225.79 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 285 | 225.92 | temperature | 25 | 1440 | > th | dose independent | sin | 16 | NA |
| 304 | 226.06 | temperature | 25 | 1440 | > th | dose independent | rect. | 10 | 14 |
| 309 | 226.14 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 356 | 226.72 | radiation | 40 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 359 | 226.77 | temperature | 25 | 1440 | < th | dose independent | sin | 16 | NA |
| 370 | 226.92 | radiation | 1 | 720 | < th | dose dependent | sin | 13 | NA |
| 417 | 227.47 | radiation | 20 | 43200 | < th | dose independent | rect. | 3 | 7 |
| 418 | 227.47 | radiation | 20 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 421 | 227.47 | radiation | 20 | 43200 | < th | dose independent | rect. | 18 | 16 |
| 434 | 227.52 | radiation | 40 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 458 | 227.66 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 476 | 227.69 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 17 |
| 486 | 227.76 | temperature | 25 | 1440 | < th | dose independent | rect. | 10 | 14 |
| 499 | 227.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 4 |
| 501 | 227.83 | wind | 1 | 43200 | < th | dose independent | rect. | 23 | 3 |
| 632 | 228.34 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 716 | 228.54 | radiation | 20 | 43200 | < th | dose independent | sin | 10 | NA |
| 757 | 228.60 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 21 |
| 782 | 228.69 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 807 | 228.77 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 808 | 228.77 | radiation | 30 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 844 | 228.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 23 |
| 916 | 229.01 | humidity | 60 | 43200 | < th | dose independent | rect. | 23 | 14 |
| 963 | 229.15 | temperature | 25 | 1440 | > th | dose independent | no | NA | NA |
| 969 | 229.16 | humidity | 60 | 43200 | > th | dose independent | rect. | 24 | 12 |