Os09g0295200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os09g0295200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 67.78 | 0.387 | 2.82 | -0.0411 | 0.0716 | -0.856 | -0.135 | 2.97 | 0.00854 | 4.72 | 50.01 | 7 | -- | -- |
| 71.31 | 0.393 | 2.82 | -0.0611 | 0.0781 | -0.436 | 0.034 | -- | 0.000435 | 4.91 | 51.78 | 6 | -- | -- |
| 67.82 | 0.384 | 2.82 | -0.0407 | 0.0729 | -0.852 | -- | 2.92 | 0.0091 | 5.42 | 50.11 | 6 | -- | -- |
| 71.31 | 0.393 | 2.82 | -0.0612 | 0.0785 | -0.433 | -- | -- | 0.000549 | 5.22 | 51.84 | 6 | -- | -- |
| 68.09 | 0.384 | 2.82 | -0.0377 | -- | -0.826 | -- | 2.91 | 0.0101 | -- | 50.15 | 6 | -- | -- |
| 73.59 | 0.402 | 2.82 | -0.0548 | 0.055 | -- | -0.143 | -- | -0.0166 | 7.99 | -- | -- | -- | -- |
| 73.65 | 0.402 | 2.82 | -0.0591 | 0.0564 | -- | -- | -- | -0.0167 | 7.46 | -- | -- | -- | -- |
| 71.62 | 0.394 | 2.82 | -0.0585 | -- | -0.41 | -- | -- | 0.00146 | -- | 51.87 | 6 | -- | -- |
| 71.41 | 0.394 | 2.82 | -- | 0.0774 | -0.433 | -- | -- | 0.00723 | 5.26 | 51.83 | 6 | -- | -- |
| 73.82 | 0.401 | 2.82 | -0.0582 | -- | -- | -- | -- | -0.0158 | -- | -- | -- | -- | -- |
| 73.74 | 0.402 | 2.82 | -- | 0.0558 | -- | -- | -- | -0.0101 | 7.53 | -- | -- | -- | -- |
| 71.71 | 0.394 | 2.82 | -- | -- | -0.41 | -- | -- | 0.00786 | -- | 51.94 | 6 | -- | -- |
| 73.91 | 0.401 | 2.82 | -- | -- | -- | -- | -- | -0.0093 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 62.48 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 4 |
| 4 | 62.51 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 9 |
| 5 | 62.52 | humidity | 70 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 9 | 62.53 | humidity | 70 | 4320 | > th | dose independent | rect. | 20 | 7 |
| 10 | 62.55 | humidity | 70 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 20 | 62.55 | humidity | 70 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 40 | 62.76 | humidity | 50 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 45 | 64.04 | wind | 9 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 48 | 64.57 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 1 |
| 49 | 64.57 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 51 | 64.93 | atmosphere | 1010 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 116 | 65.20 | humidity | 50 | 10 | > th | dose independent | sin | 7 | NA |
| 168 | 65.47 | atmosphere | 1010 | 30 | > th | dose dependent | sin | 23 | NA |
| 297 | 65.61 | wind | 9 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 589 | 66.64 | humidity | 60 | 270 | < th | dose independent | rect. | 10 | 1 |
| 591 | 66.67 | wind | 9 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 728 | 67.55 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 732 | 67.55 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 783 | 67.55 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 787 | 67.55 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 842 | 67.65 | humidity | 50 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 944 | 68.09 | humidity | 70 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 948 | 68.12 | humidity | 60 | 90 | < th | dose dependent | rect. | 11 | 1 |