Os09g0293500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os09g0293500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 104.81 | 0.481 | 6.47 | 2.41 | 0.696 | 1.27 | 0.0643 | -0.495 | 0.537 | 20.8 | 22.6 | 1850 | -- | -- |
| 105.17 | 0.478 | 6.48 | 2.27 | 0.713 | 1.32 | 0.07 | -- | 0.488 | 20.7 | 22.26 | 1931 | -- | -- |
| 104.82 | 0.477 | 6.47 | 2.41 | 0.697 | 1.27 | -- | -0.497 | 0.538 | 20.8 | 22.6 | 1860 | -- | -- |
| 105.2 | 0.478 | 6.48 | 2.27 | 0.713 | 1.32 | -- | -- | 0.49 | 20.8 | 22.22 | 1931 | -- | -- |
| 130.37 | 0.532 | 6.45 | 2.36 | -- | 1.25 | -- | -0.438 | 0.518 | -- | 22.7 | 1611 | -- | -- |
| 169.74 | 0.611 | 6.59 | 1.75 | 0.655 | -- | 0.125 | -- | 0.0303 | 20.7 | -- | -- | -- | -- |
| 169.8 | 0.61 | 6.59 | 1.74 | 0.655 | -- | -- | -- | 0.0302 | 20.7 | -- | -- | -- | -- |
| 130.29 | 0.532 | 6.47 | 2.21 | -- | 1.28 | -- | -- | 0.469 | -- | 22.34 | 1623 | -- | -- |
| 234.7 | 0.714 | 6.46 | -- | 0.585 | 1.2 | -- | -- | 0.388 | 20.9 | 22.6 | 1380 | -- | -- |
| 194.04 | 0.651 | 6.57 | 1.74 | -- | -- | -- | -- | 0.0248 | -- | -- | -- | -- | -- |
| 249.94 | 0.74 | 6.63 | -- | 0.651 | -- | -- | -- | -0.164 | 20.9 | -- | -- | -- | -- |
| 247.94 | 0.733 | 6.57 | -- | -- | 0.831 | -- | -- | 0.11 | -- | 22.5 | 1491 | -- | -- |
| 274.13 | 0.773 | 6.61 | -- | -- | -- | -- | -- | -0.168 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 98.75 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 3 | 99.07 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 6 | 99.58 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 9 | 99.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 10 | 100.04 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 14 |
| 15 | 100.37 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 134 | 103.26 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 298 | 106.20 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 303 | 106.25 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 390 | 107.67 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 684 | 110.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 908 | 111.26 | temperature | 15 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 934 | 111.32 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 964 | 111.40 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |