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Os09g0284300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0235) R2 : 0.848
β1 : 1.94 (0.0861) R2dD : 0.176 R2D : 0.124
β2 : 3.94 (0.1) R2dC : 1.55 R2C : 0.297
β3 : 1.65 (0.0864) R2dE : 0.361 R2E : -0.849
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.464 (0.0504) R2dN8 : 0.0388 R2N8 : -0.0124
σ : 0.441
deviance : 88.4
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_____
C
peak time of C : 14.9
E
wheather : radiation
threshold : 4.024
memory length : 8
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 3.55
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.7 0.427 11.2 1.93 3.99 1.68 0.691 1.65 0.468 14.9 4.233 9 3.63 --
85.04 0.433 11.2 1.98 4.02 1.77 -1.04 -- 0.472 14.7 3.426 13 3.96 --
82.31 0.426 11.2 1.94 3.96 1.67 -- 1.14 0.465 14.9 4.233 9 3.63 --
88.4 0.441 11.2 1.94 3.94 1.65 -- -- 0.464 14.9 4.024 8 3.55 --
120.6 0.511 11.2 1.94 -- -2.59 -- 0.526 0.408 -- 87.82 250 3.63 --
125.02 0.524 11.2 1.92 2.63 -- -0.459 -- 0.408 16.1 -- -- -- --
125.6 0.525 11.2 1.91 2.63 -- -- -- 0.406 16.1 -- -- -- --
119.34 0.509 11.2 1.92 -- -2.59 -- -- 0.391 -- 43.47 309 3.85 --
186.94 0.64 11.2 -- 3.99 1.73 -- -- 0.253 14.9 5.431 8 3.66 --
499.5 1.04 11.2 1.81 -- -- -- -- 0.336 -- -- -- -- --
222.12 0.697 11.2 -- 2.59 -- -- -- 0.192 16.2 -- -- -- --
216.33 0.685 11.2 -- -- -2.56 -- -- 0.185 -- 34.98 332 3.99 --
585.69 1.13 11.2 -- -- -- -- -- 0.135 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 70.92 radiation 40.0 270 < th dose dependent rect. 15 16
2 72.39 radiation 20.0 270 < th dose independent rect. 15 16
5 72.77 humidity 50.0 270 > th dose independent rect. 15 16
10 74.67 wind 9.0 270 < th dose independent rect. 7 9
12 75.42 precipitation 0.1 270 < th dose independent rect. 7 9
13 75.42 precipitation 0.1 270 < th dose dependent rect. 7 9
14 75.50 temperature 10.0 270 > th dose independent rect. 7 9
15 75.50 atmosphere 1015.0 270 < th dose independent rect. 7 9
16 75.50 temperature 10.0 270 > th dose independent rect. 16 15
19 75.64 atmosphere 995.0 270 > th dose independent rect. 7 9
20 75.74 wind 7.0 270 < th dose independent rect. 7 20
21 76.13 wind 9.0 270 < th dose independent rect. 16 15
22 76.14 wind 7.0 270 < th dose independent rect. 8 18
24 76.50 precipitation 0.1 270 < th dose independent rect. 3 4
25 76.50 precipitation 0.1 270 < th dose dependent rect. 3 4
29 76.86 precipitation 0.1 270 < th dose independent rect. 2 6
30 76.86 precipitation 0.1 270 < th dose dependent rect. 2 6
31 76.86 radiation 40.0 270 < th dose dependent rect. 2 7
35 77.12 radiation 1.0 270 > th dose independent rect. 7 9
36 77.13 precipitation 0.1 270 < th dose independent rect. 16 15
38 77.13 precipitation 0.1 270 < th dose dependent rect. 16 15
45 77.23 radiation 20.0 270 < th dose independent rect. 2 6
50 77.48 wind 5.0 270 < th dose independent rect. 3 4
56 77.54 radiation 20.0 270 < th dose independent rect. 3 4
58 77.60 humidity 70.0 270 > th dose independent rect. 3 4
59 77.69 humidity 70.0 270 > th dose independent rect. 2 6
61 77.72 wind 7.0 270 < th dose independent rect. 2 6
64 77.76 radiation 40.0 270 < th dose dependent rect. 3 4
66 77.77 temperature 10.0 270 > th dose independent rect. 3 4
68 77.77 temperature 30.0 270 < th dose independent rect. 3 4
69 77.77 humidity 50.0 270 > th dose independent rect. 3 4
71 77.77 atmosphere 995.0 270 > th dose independent rect. 3 4
72 77.77 atmosphere 1015.0 270 < th dose independent rect. 3 4
74 77.77 temperature 10.0 270 > th dose independent rect. 7 20
78 77.93 precipitation 0.1 270 < th dose independent rect. 8 18
80 77.93 precipitation 0.1 270 < th dose dependent rect. 8 18
84 78.08 temperature 10.0 270 > th dose independent rect. 2 6
86 78.08 temperature 30.0 270 < th dose independent rect. 2 6
87 78.08 humidity 50.0 270 > th dose independent rect. 2 6
89 78.08 atmosphere 995.0 270 > th dose independent rect. 2 6
90 78.08 atmosphere 1015.0 270 < th dose independent rect. 2 6
91 78.08 temperature 10.0 270 > th dose independent rect. 8 18
92 78.09 wind 9.0 270 < th dose dependent rect. 3 4
94 78.17 precipitation 0.1 270 < th dose independent rect. 7 20
95 78.17 precipitation 0.1 270 < th dose dependent rect. 7 20
131 78.94 temperature 10.0 270 > th dose dependent rect. 3 4
161 79.32 atmosphere 995.0 270 > th dose independent rect. 16 15
174 79.81 humidity 50.0 270 > th dose independent rect. 7 8
175 79.81 temperature 10.0 270 > th dose dependent rect. 21 5
179 80.05 humidity 50.0 270 > th dose dependent rect. 3 4
218 80.84 humidity 50.0 270 > th dose dependent rect. 2 7
220 80.89 atmosphere 995.0 270 > th dose independent rect. 8 18
231 81.17 wind 1.0 270 > th dose independent rect. 7 8
236 81.34 temperature 10.0 90 > th dose dependent rect. 9 19
243 81.44 atmosphere 995.0 270 > th dose independent rect. 7 20
257 81.62 temperature 10.0 270 > th dose dependent rect. 2 6
260 81.69 humidity 50.0 270 > th dose independent rect. 2 18
278 81.82 temperature 15.0 270 > th dose independent rect. 20 7
279 81.82 humidity 50.0 270 > th dose independent rect. 3 16
327 82.25 humidity 50.0 270 > th dose independent rect. 13 8
328 82.27 temperature 15.0 270 > th dose independent rect. 21 5
355 82.41 wind 9.0 270 < th dose independent rect. 22 15
356 82.41 temperature 10.0 270 > th dose dependent rect. 7 19
364 82.63 temperature 30.0 270 < th dose independent rect. 16 15
380 82.77 temperature 10.0 270 > th dose independent rect. 13 9
381 82.77 temperature 10.0 270 > th dose independent rect. 22 15
382 82.77 atmosphere 995.0 270 > th dose independent rect. 22 15
390 82.83 temperature 30.0 270 < th dose independent rect. 20 7
391 82.83 humidity 50.0 270 > th dose independent rect. 20 7
394 82.83 atmosphere 995.0 270 > th dose independent rect. 20 7
396 82.83 radiation 1.0 270 < th dose independent rect. 20 7
401 82.83 temperature 10.0 270 > th dose independent rect. 3 17
402 82.83 atmosphere 1015.0 270 < th dose independent rect. 3 17
403 82.83 radiation 1.0 270 < th dose dependent rect. 20 7
408 82.84 wind 9.0 270 < th dose independent rect. 20 7
410 82.87 wind 9.0 10 < th dose independent rect. 9 20
414 82.93 temperature 10.0 270 > th dose dependent rect. 22 3
433 83.10 temperature 15.0 10 > th dose independent rect. 9 20
441 83.19 temperature 10.0 10 > th dose dependent rect. 9 20
449 83.27 wind 5.0 270 < th dose independent rect. 21 5
452 83.29 precipitation 0.1 270 < th dose independent rect. 20 7
454 83.29 precipitation 0.1 270 < th dose dependent rect. 20 7
455 83.30 wind 9.0 270 < th dose independent rect. 21 5
457 83.30 temperature 30.0 270 < th dose independent rect. 21 5
458 83.30 humidity 50.0 270 > th dose independent rect. 21 5
461 83.30 atmosphere 995.0 270 > th dose independent rect. 21 5
462 83.30 radiation 1.0 270 < th dose independent rect. 21 5
467 83.30 temperature 10.0 270 > th dose independent rect. 2 19
468 83.30 radiation 1.0 270 < th dose dependent rect. 21 5
474 83.32 precipitation 0.1 270 < th dose independent rect. 3 17
476 83.32 precipitation 0.1 270 < th dose dependent rect. 3 17
481 83.42 precipitation 0.1 270 < th dose independent rect. 21 5
483 83.42 precipitation 0.1 270 < th dose dependent rect. 21 5
484 83.43 radiation 1.0 270 > th dose independent sin 1 NA
494 83.43 temperature 10.0 10 > th dose dependent rect. 22 7
508 83.65 precipitation 0.1 10 < th dose independent rect. 5 4
509 83.65 precipitation 0.1 10 < th dose dependent rect. 5 4
512 83.70 atmosphere 1015.0 270 < th dose independent rect. 2 19
513 83.70 precipitation 0.1 270 < th dose independent rect. 2 19
515 83.70 precipitation 0.1 270 < th dose dependent rect. 2 19
518 83.80 radiation 40.0 10 < th dose independent rect. 5 4
520 83.82 temperature 10.0 10 > th dose dependent rect. 5 4
526 83.85 wind 7.0 10 < th dose independent rect. 5 4
528 83.85 temperature 10.0 10 > th dose independent rect. 5 4
530 83.85 temperature 30.0 10 < th dose independent rect. 5 4
531 83.85 humidity 50.0 10 > th dose independent rect. 5 4
533 83.85 atmosphere 995.0 10 > th dose independent rect. 5 4
534 83.85 atmosphere 1015.0 10 < th dose independent rect. 5 4
540 83.90 wind 9.0 270 < th dose dependent rect. 21 5
543 83.94 wind 9.0 10 < th dose dependent rect. 5 4
550 84.06 precipitation 0.1 270 < th dose independent rect. 22 15
552 84.06 precipitation 0.1 270 < th dose dependent rect. 22 15
556 84.08 humidity 50.0 270 > th dose dependent rect. 21 5
558 84.10 wind 1.0 270 > th dose independent rect. 13 9
561 84.12 humidity 50.0 270 > th dose independent rect. 22 15
575 84.34 wind 9.0 270 < th dose dependent rect. 8 18
621 84.49 wind 9.0 270 < th dose independent rect. 3 17
632 84.62 radiation 1.0 10 > th dose independent rect. 5 4
659 84.73 wind 9.0 270 < th dose independent rect. 13 9
670 84.76 radiation 1.0 270 < th dose independent rect. 3 16
674 84.80 temperature 15.0 10 > th dose independent rect. 22 7
688 84.91 wind 1.0 270 > th dose independent rect. 15 16
691 84.95 wind 9.0 270 < th dose independent rect. 2 19
698 84.99 radiation 1.0 10 < th dose dependent sin 9 NA
702 85.00 precipitation 0.1 270 < th dose independent rect. 13 9
707 85.00 precipitation 0.1 270 < th dose dependent rect. 13 9
710 85.07 wind 9.0 270 < th dose dependent rect. 22 3
713 85.16 wind 5.0 270 < th dose independent rect. 22 3
715 85.16 radiation 1.0 270 < th dose dependent rect. 3 16
728 85.18 atmosphere 1015.0 270 < th dose independent rect. 13 8
734 85.23 temperature 15.0 270 > th dose independent rect. 22 3
762 85.40 radiation 1.0 10 < th dose dependent rect. 22 8
771 85.49 atmosphere 1015.0 270 < th dose independent rect. 8 18
777 85.53 radiation 1.0 90 > th dose independent rect. 9 10
800 85.60 humidity 60.0 10 > th dose independent rect. 17 16
812 85.69 atmosphere 1015.0 270 < th dose independent rect. 15 16
862 85.89 humidity 50.0 270 > th dose dependent rect. 22 3
869 85.93 wind 1.0 270 > th dose independent rect. 2 5
870 85.94 radiation 1.0 30 < th dose independent sin 10 NA
886 85.98 atmosphere 995.0 10 > th dose independent rect. 9 20
887 85.98 wind 9.0 270 < th dose dependent rect. 7 8
896 86.02 wind 9.0 10 < th dose independent rect. 22 7
898 86.02 temperature 30.0 10 < th dose independent rect. 22 7
899 86.02 humidity 50.0 10 > th dose independent rect. 22 7
902 86.02 atmosphere 995.0 10 > th dose independent rect. 22 7
903 86.02 radiation 1.0 10 < th dose independent rect. 22 7
908 86.02 temperature 10.0 10 > th dose independent rect. 5 17
910 86.02 atmosphere 1015.0 10 < th dose independent rect. 5 17
934 86.19 precipitation 0.1 10 < th dose independent rect. 5 17
936 86.19 precipitation 0.1 10 < th dose dependent rect. 5 17
943 86.26 atmosphere 1015.0 270 < th dose independent rect. 22 15
958 86.31 humidity 80.0 270 > th dose independent rect. 22 3
964 86.32 precipitation 0.1 270 < th dose independent rect. 22 3
965 86.32 precipitation 0.1 270 < th dose dependent rect. 22 3
968 86.33 temperature 30.0 270 < th dose independent rect. 22 3
969 86.33 humidity 50.0 270 > th dose independent rect. 22 3
972 86.33 atmosphere 995.0 270 > th dose independent rect. 22 3
973 86.33 radiation 1.0 270 < th dose independent rect. 22 3
979 86.33 temperature 10.0 270 > th dose independent rect. 1 21
980 86.33 radiation 1.0 270 < th dose dependent rect. 22 3