Os09g0281300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1218 family protein.
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Os09g0281300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1218 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25.65 | 0.238 | 11.6 | 0.327 | 0.645 | -1.15 | -0.254 | 0.248 | 0.189 | 20.8 | 29.6 | 100 | -- | -- |
| 25.73 | 0.236 | 11.6 | 0.369 | 0.645 | -1.16 | -0.227 | -- | 0.195 | 20.8 | 29.5 | 101 | -- | -- |
| 25.86 | 0.237 | 11.6 | 0.345 | 0.644 | -1.15 | -- | 0.173 | 0.193 | 20.8 | 29.55 | 103 | -- | -- |
| 25.9 | 0.237 | 11.6 | 0.372 | 0.647 | -1.16 | -- | -- | 0.195 | 20.8 | 29.5 | 101 | -- | -- |
| 38.3 | 0.288 | 11.6 | 0.112 | -- | -1.54 | -- | 1.25 | 0.145 | -- | 87.31 | 458 | -- | -- |
| 43.45 | 0.309 | 11.5 | 0.662 | 0.764 | -- | -0.0814 | -- | 0.43 | 18.8 | -- | -- | -- | -- |
| 43.47 | 0.309 | 11.5 | 0.663 | 0.764 | -- | -- | -- | 0.43 | 18.8 | -- | -- | -- | -- |
| 38.08 | 0.287 | 11.6 | 0.299 | -- | -1.5 | -- | -- | 0.13 | -- | 30.05 | 429 | -- | -- |
| 29.12 | 0.251 | 11.6 | -- | 0.593 | -1.29 | -- | -- | 0.121 | 21 | 29.3 | 148 | -- | -- |
| 74.04 | 0.402 | 11.5 | 0.646 | -- | -- | -- | -- | 0.415 | -- | -- | -- | -- | -- |
| 55.06 | 0.347 | 11.5 | -- | 0.756 | -- | -- | -- | 0.356 | 18.9 | -- | -- | -- | -- |
| 40.07 | 0.295 | 11.6 | -- | -- | -1.55 | -- | -- | 0.0876 | -- | 29.87 | 436 | -- | -- |
| 85.06 | 0.43 | 11.5 | -- | -- | -- | -- | -- | 0.344 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 10 | 25.03 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 14 | 25.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 24 | 25.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 32 | 25.74 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 33 | 25.74 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 38 | 25.78 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 50 | 26.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 55 | 26.19 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 61 | 26.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 64 | 26.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 76 | 26.40 | temperature | 15 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 89 | 26.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 112 | 26.66 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 23 |
| 126 | 26.79 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 136 | 26.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 146 | 26.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 176 | 26.97 | temperature | 25 | 1440 | < th | dose dependent | sin | 15 | NA |
| 192 | 27.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 19 |
| 198 | 27.04 | temperature | 25 | 1440 | < th | dose dependent | rect. | 10 | 17 |
| 262 | 27.17 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 267 | 27.18 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 283 | 27.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 404 | 27.43 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 522 | 27.62 | temperature | 25 | 90 | < th | dose dependent | sin | 22 | NA |
| 575 | 27.74 | temperature | 20 | 1440 | > th | dose independent | rect. | 16 | 14 |
| 585 | 27.76 | temperature | 20 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 658 | 27.90 | temperature | 20 | 1440 | > th | dose independent | rect. | 18 | 19 |
| 702 | 27.96 | temperature | 20 | 1440 | > th | dose independent | sin | 14 | NA |
| 704 | 27.96 | temperature | 20 | 1440 | < th | dose independent | rect. | 17 | 13 |
| 724 | 27.99 | temperature | 20 | 1440 | < th | dose independent | rect. | 9 | 21 |
| 797 | 28.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 802 | 28.09 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 828 | 28.12 | temperature | 20 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 859 | 28.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 23 |
| 909 | 28.21 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 948 | 28.25 | temperature | 20 | 1440 | < th | dose independent | sin | 13 | NA |